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NECEvent2014_8_3_scaffold_465

Alias: 178_003_scaffold_465

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_465_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..471)
DNA (471bp) protein (157aa)
Transposase, IS605 OrfB family n=2 Tax=Clostridium perfringens RepID=Q0TQL8_CLOP1
IS605 family transposase OrfB
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EDT22585.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B st
NECEvent2014_8_3_scaffold_465_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(519..704)
DNA (186bp) protein (62aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V2I0_CLOPF
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDT72019.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
resolvase domain-containing protein
NECEvent2014_8_3_scaffold_465_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(689..943)
DNA (255bp) protein (85aa)
Resolvase, N terminal domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0E782_CLOSO
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDT72019.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
resolvase domain-containing protein
NECEvent2014_8_3_scaffold_465_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1165..1956)
DNA (792bp) protein (264aa)
D-alanyl-D-alanine carboxypeptidase family protein n=3 Tax=Clostridium perfringens RepID=H7CWB3_CLOPF rbh
D-alanyl-D-alanine carboxypeptidase family protein {ECO:0000313|EMBL:EDT25484.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
D-alanyl-D-alanine carboxypeptidase
NECEvent2014_8_3_scaffold_465_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2226..2552)
DNA (327bp) protein (109aa)
Conserved domain protein n=3 Tax=Clostridium perfringens RepID=Q0TQL6_CLOP1
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT25489.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
NECEvent2014_8_3_scaffold_465_trna_1
unknown

Not on your lists

comp(2759..2842)
DNA (84bp)
transferRNA
NECEvent2014_8_3_scaffold_465_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3037..3978
DNA (942bp) protein (314aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CWB5_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17068.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_465_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4016..4885)
DNA (870bp) protein (290aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=6 Tax=Clostridium perfringens RepID=H7CWB6_CLOPF rbh
NECEvent2014_8_3_scaffold_465_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5075..5176)
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CWB7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17070.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_465_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5233..5829)
DNA (597bp) protein (199aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=H7CWB8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS81485.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_465_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5931..6854
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XKL0_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81090.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_465_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6994..7560)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXM6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT13542.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_465_12
unknown

Not on your lists

comp(7756..7953)
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_465_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7919..8134)
DNA (216bp) protein (72aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CWC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT25473.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_3_scaffold_465_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8170..8631)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXM4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT13553.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_465_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8848..9441)
DNA (594bp) protein (198aa)
Probable GTP-binding protein EngB n=8 Tax=Clostridium perfringens RepID=ENGB_CLOP1 rbh
engB; ribosome biogenesis GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_3_scaffold_465_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9441..11771)
DNA (2331bp) protein (777aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
Lon protease n=2 Tax=Clostridium perfringens RepID=Q8XKK4_CLOPE rbh
lonA; ATP-dependent protease La
NECEvent2014_8_3_scaffold_465_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11893..13605)
DNA (1713bp) protein (571aa)
Lon-like ATP-dependent protease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKK3_CLOPE rbh
lonB; Lon-like ATP-dependent protease
Lon-like ATP-dependent protease {ECO:0000313|EMBL:BAB81097.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (st
NECEvent2014_8_3_scaffold_465_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13716..15023)
DNA (1308bp) protein (436aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=9 Tax=Clostridium perfringens RepID=CLPX_CLOP1 rbh
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_8_3_scaffold_465_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15063..15647)
DNA (585bp) protein (195aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; TaxID=195102 spe
ATP-dependent Clp protease proteolytic subunit n=11 Tax=Clostridium perfringens RepID=CLPP_CLOP1 rbh
NECEvent2014_8_3_scaffold_465_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15838..17124)
DNA (1287bp) protein (429aa)
tig; trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=9 Tax=Clostridium perfringens RepID=TIG_CLOP1 rbh
Displaying 21 items

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