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NECEvent2014_8_3_scaffold_648

Alias: 178_003_scaffold_648

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_648_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4..786)
DNA (783bp) protein (261aa)
Histidinol phosphatase n=2 Tax=Clostridium perfringens RepID=B1BUM3_CLOPF rbh
Histidinol phosphatase {ECO:0000313|EMBL:BAE79087.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hisB; histidinol phosphatase
NECEvent2014_8_3_scaffold_648_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(950..1039)
DNA (90bp) protein (30aa)
ISCpe3, transposase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SV93_CLOPS
ISCpe3, transposase {ECO:0000313|EMBL:ABG87231.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
ISCpe3, transposase
NECEvent2014_8_3_scaffold_648_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1170..1664)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM4_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:BAE79088.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
NECEvent2014_8_3_scaffold_648_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1730..1957)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:BAE79089.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
NECEvent2014_8_3_scaffold_648_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2243..2773)
DNA (531bp) protein (177aa)
LexA repressor n=2 Tax=Clostridium perfringens RepID=B1BUM6_CLOPF rbh
LexA repressor {ECO:0000313|EMBL:EDT14620.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
lexa repressor
NECEvent2014_8_3_scaffold_648_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2840..3310)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM7_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT14583.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_648_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3533..3856
DNA (324bp) protein (108aa)
Transcriptional regulator n=2 Tax=Clostridium perfringens RepID=B1BUM8_CLOPF
Transcriptional regulator {ECO:0000313|EMBL:AEP94973.1}; Uncharacterized protein {ECO:0000313|EMBL:BAE79135.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
PadR family transcriptional regulator
NECEvent2014_8_3_scaffold_648_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3860..4501
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BUM9_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT14578.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_648_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4512..5309)
DNA (798bp) protein (266aa)
Beta-2 toxin n=3 Tax=Clostridium perfringens RepID=B1BUN0_CLOPF rbh
Beta-2 toxin {ECO:0000313|EMBL:EDT14589.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
cpb2; beta2-toxin
NECEvent2014_8_3_scaffold_648_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5561..5680
DNA (120bp) protein (40aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=H7D049_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14594.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_648_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5664..5792)
DNA (129bp) protein (43aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7D050_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA15659.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_648_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5810..5917)
DNA (108bp) protein (36aa)
Signal peptidase I n=1 Tax=Clostridium perfringens RepID=B6F188_CLOPF
Signal peptidase I {ECO:0000313|EMBL:BAG75505.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
NECEvent2014_8_3_scaffold_648_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5938..6672)
DNA (735bp) protein (245aa)
Resolvase/recombinase n=2 Tax=Clostridium perfringens RepID=B1BUN2_CLOPF rbh
Putative resolvase {ECO:0000313|EMBL:AAW79186.1}; Putative site-specific serine recombinase-resolvase family protein {ECO:0000313|EMBL:AFV15154.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia
resP; putative site-specific serine recombinase-resolvase family protein ResP
NECEvent2014_8_3_scaffold_648_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7752..7904)
DNA (153bp) protein (51aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7D052_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15661.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_648_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8452..9321)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=5 Tax=Clostridium perfringens RepID=B1BUN4_CLOPF rbh
Putative AraC-related transcriptional regulator {ECO:0000313|EMBL:EIA15662.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
AraC family transcriptional regulator
NECEvent2014_8_3_scaffold_648_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9772..10050)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7D054_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:AEP95104.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
NECEvent2014_8_3_scaffold_648_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10242..12200)
DNA (1959bp) protein (653aa)
Ribosomal protection-like tetracycline resistance protein n=5 Tax=Clostridium perfringens RepID=H7D055_CLOPF rbh
Tetracycline resistance protein TetP {ECO:0000313|EMBL:EDT72369.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
tetP; tetracycline resistance protein
NECEvent2014_8_3_scaffold_648_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12184..12507)
DNA (324bp) protein (108aa)
Tetracycline efflux protein n=7 Tax=Bacteria RepID=H7D056_CLOPF
TetA {ECO:0000313|EMBL:EDT14619.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
major facilitator superfamily
Displaying 18 items

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