ggKbase home page

NECEvent2014_8_3_scaffold_25_14

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 14877..15548

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=4 Tax=Clostridium perfringens RepID=B1BHM8_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 432
  • Evalue 2.20e-118
  • rbh
DNA-binding protein {ECO:0000313|EMBL:EDT15345.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 223.0
  • Bit_score: 432
  • Evalue 3.10e-118
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 223.0
  • Bit_score: 431
  • Evalue 1.80e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 672
ATGAGTAGAGTTGGGGAAAGAATAAAAGAGGCTAGAGAAAAAAGTGGAATGACACAAAAAGCTTTAGCTAAAAAGCTAGGTGTAGCTGAGAAGTTTGTAAATGAAGTTGAAACAGGAAGAAAAATCATAAATGAATCACTTATATCAAAGGTATCAAAGGTTTTAAATACTGATTTAAATGATATAAATATGGTTGTTACTGATGAGGAACTTCAAAAAGAACTTAAAGCTGAAAAGCAAGTAAGACAAACAAAACCAGCAGAGGTTAATGAAGTTTGGAATCAAGCTTTTGGATCAGTTTTAAAAAATGTTCCAATATATGATTATTCATTAGCTCAGGTTAAGGGATATAAACAACTTGCCACTGCTTCAAATAAAATAGATGGTCATACAGCAAACAAAGTTTTTTATTTAAAAATAGAAAATAACGATATGACTGGCTATAGAATTCAAGAGAATGATTTAGCTTTATGCTATTCAATAAAAGAGATAGAAAATAATTCTATTTGTTTAGTTGAATTCAATGGAAAGAGAGTTATTAGACAAATTAAAAAGCTAGATAATGTTAAGGCTTTATTAATAAGCAATAATGGTAGCATGAGAACAGAGACAGCTAACATAAAAGAAGTTAAGTCAATTGCTAAGCTTTATAGAATAGAATTTGATTTATAA
PROTEIN sequence
Length: 224
MSRVGERIKEAREKSGMTQKALAKKLGVAEKFVNEVETGRKIINESLISKVSKVLNTDLNDINMVVTDEELQKELKAEKQVRQTKPAEVNEVWNQAFGSVLKNVPIYDYSLAQVKGYKQLATASNKIDGHTANKVFYLKIENNDMTGYRIQENDLALCYSIKEIENNSICLVEFNGKRVIRQIKKLDNVKALLISNNGSMRTETANIKEVKSIAKLYRIEFDL*