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NECEvent2014_8_3_scaffold_25

Alias: 178_003_scaffold_25

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_25_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..168
DNA (168bp) protein (56aa)
ISCpe2, transposase orfB n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVH5_CLOPS
ISCpe2, transposase orfB
ISCpe2, transposase OrfB {ECO:0000313|EMBL:EDT27893.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
NECEvent2014_8_3_scaffold_25_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

373..990
DNA (618bp) protein (206aa)
3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00527}; EC=3.2.2.- {ECO:0000255|HAMAP-Rule:MF_00527};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
Putative 3-methyladenine DNA glycosylase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=3MGH_CLOPS rbh
NECEvent2014_8_3_scaffold_25_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1059..2531
DNA (1473bp) protein (491aa)
[Fe] hydrogenase n=3 Tax=Clostridium perfringens RepID=B1RFV0_CLOPF rbh
[Fe] hydrogenase
Probable hydrogenase {ECO:0000313|EMBL:BAB82281.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / T
NECEvent2014_8_3_scaffold_25_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2787..3443)
DNA (657bp) protein (219aa)
Conserved domain protein n=7 Tax=Clostridium perfringens RepID=Q0TM77_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82280.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_25_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4101..5150
DNA (1050bp) protein (350aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=2 Tax=Clostridium perfringens RepID=B1UZR6_CLOPF rbh
NECEvent2014_8_3_scaffold_25_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5163..8366
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSI2_CLOPF rbh
NECEvent2014_8_3_scaffold_25_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8980..9621
DNA (642bp) protein (214aa)
VanZ family protein n=5 Tax=Clostridium perfringens RepID=Q0TM80_CLOP1 rbh
vanZ family protein
VanZ family protein {ECO:0000313|EMBL:EDT24281.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 362
NECEvent2014_8_3_scaffold_25_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9861..10145
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFU4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27217.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
hypothetical protein
NECEvent2014_8_3_scaffold_25_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10235..12136)
DNA (1902bp) protein (634aa)
Probable glutamine synthetase n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHB6_CLOPE rbh
Probable glutamine synthetase {ECO:0000313|EMBL:BAB82275.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
glutamine synthetase
NECEvent2014_8_3_scaffold_25_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12435..13217
DNA (783bp) protein (261aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000255|HAMAP-Rule:MF_00258}; EC=5.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00258};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
Glutamate racemase n=2 Tax=Clostridium perfringens RepID=MURI_CLOPS rbh
NECEvent2014_8_3_scaffold_25_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13450..13719
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SPY9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27263.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4
NECEvent2014_8_3_scaffold_25_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13960..14472
DNA (513bp) protein (171aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Clostridium perfringens RepID=Q0TM85_CLOP1 rbh
NECEvent2014_8_3_scaffold_25_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14501..14875
DNA (375bp) protein (125aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=Q8XHC0_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15348.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_25_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14877..15548
DNA (672bp) protein (224aa)
DNA-binding protein n=4 Tax=Clostridium perfringens RepID=B1BHM8_CLOPF rbh
DNA-binding protein {ECO:0000313|EMBL:EDT15345.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.
hypothetical protein
NECEvent2014_8_3_scaffold_25_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15689..17425
DNA (1737bp) protein (579aa)
CspA protein n=1 Tax=Clostridium perfringens RepID=Q93RI0_CLOPF rbh
Serine protease A {ECO:0000313|EMBL:EDS80653.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Ser-type protease
NECEvent2014_8_3_scaffold_25_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17441..19138
DNA (1698bp) protein (566aa)
Ser-type protease n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHC3_CLOPE rbh
protease CspB
Protease CspB {ECO:0000313|EMBL:EDS80650.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
NECEvent2014_8_3_scaffold_25_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19141..20889
DNA (1749bp) protein (583aa)
Serine protease C n=2 Tax=Clostridium perfringens RepID=B1RFT5_CLOPF rbh
Ser-type protease rbh
Serine protease C {ECO:0000313|EMBL:EDT27203.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
NECEvent2014_8_3_scaffold_25_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21012..22328
DNA (1317bp) protein (439aa)
Spore cortex-lytic enzyme n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHC5_CLOPE rbh
spore cortex-lytic enzyme SleC
Spore cortex-lytic enzyme {ECO:0000313|EMBL:BAB82266.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 1
NECEvent2014_8_3_scaffold_25_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22380..23432)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XHC6_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82265.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_25_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23592..24677
DNA (1086bp) protein (362aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFT2_CLOPF rbh
Putative lipoprotein {ECO:0000313|EMBL:EDT27202.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969
hypothetical protein
NECEvent2014_8_3_scaffold_25_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24770..25705
DNA (936bp) protein (312aa)
Radical SAM family protein n=10 Tax=Clostridium perfringens RepID=H7CZR2_CLOPF rbh
radical SAM family protein
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EDT15381.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_3_scaffold_25_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25732..26475
DNA (744bp) protein (248aa)
Probable 2-phosphosulfolactate phosphatase {ECO:0000256|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000256|HAMAP-Rule:MF_00490};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
comB; 2-phosphosulfolactate phosphatase (EC:3.1.3.71)
Probable 2-phosphosulfolactate phosphatase n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFT0_CLOPF rbh
NECEvent2014_8_3_scaffold_25_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26736..27179
DNA (444bp) protein (148aa)
Conserved domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RFS9_CLOPF
Conserved domain protein {ECO:0000313|EMBL:EDT27235.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F
hypothetical protein
NECEvent2014_8_3_scaffold_25_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27446..28153
DNA (708bp) protein (236aa)
Probable glycerol uptake facilitator protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XHD1_CLOPE rbh
glpF; glycerol uptake facilitator protein
Probable glycerol uptake facilitator protein {ECO:0000313|EMBL:BAB82260.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_8_3_scaffold_25_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28195..28755
DNA (561bp) protein (187aa)
Glycerol uptake operon antiterminator n=9 Tax=Clostridium perfringens RepID=H7CZQ8_CLOPF rbh
glpP; glycerol uptake operon antiterminator
Glycerol uptake operon antiterminator {ECO:0000313|EMBL:EIA15858.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringe
NECEvent2014_8_3_scaffold_25_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28775..30277
DNA (1503bp) protein (501aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:
Glycerol kinase n=5 Tax=Clostridium perfringens RepID=GLPK_CLOPE rbh
NECEvent2014_8_3_scaffold_25_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30443..31873
DNA (1431bp) protein (477aa)
FAD-dependent oxidoreductase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1UZU1_CLOPF rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:EDT72925.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str.
FAD-dependent oxidoreductase
NECEvent2014_8_3_scaffold_25_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31886..33139
DNA (1254bp) protein (418aa)
Pyridine nucleotide-disulfide family oxidoreductase n=6 Tax=Clostridium perfringens RepID=H7CZQ5_CLOPF rbh
pyridine nucleotide-disulfide family oxidoreductase
Pyridine nucleotide-disulfide family oxidoreductase {ECO:0000313|EMBL:EIA15855.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_8_3_scaffold_25_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33142..33489
DNA (348bp) protein (116aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CZQ4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA15854.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_25_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33853..35028)
DNA (1176bp) protein (392aa)
Putative methyltransferase n=4 Tax=Clostridium perfringens RepID=H7CZQ3_CLOPF rbh
Putative methyltransferase {ECO:0000313|EMBL:EIA15853.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
putative methyltransferase
Displaying items 1-30 of 59 in total

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