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NECEvent2014_8_3_scaffold_31_8

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 7101..8663

Top 3 Functional Annotations

Value Algorithm Source
LysM domain protein n=4 Tax=Clostridium perfringens RepID=Q0TN97_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 520.0
  • Bit_score: 1027
  • Evalue 0.0
  • rbh
lysM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 520.0
  • Bit_score: 1026
  • Evalue 0.0
LysM domain protein {ECO:0000313|EMBL:EDT27045.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 520.0
  • Bit_score: 1026
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1563
TTGGTTAATTTAGATATTATTAAAGAAAGTCTTGGGTTTGAGAAGGTCTTAAGTGAAAACTCTTTAGATATACCTTTTAGAGAAGAATACTTAATACCAGATACTCAACCAGATGTTCATGATGTACTTTCAGTTGATACTAAAGTATATGTACTTAACAGAGAAGTTCAAAGTGATAGAGTATTATTAGAATATGAAGTTGAGTGTAATATTATGTACTTAGCTAGAGAAGAAGAAGGTTTAGGGATAAATAGCGTTATTTATAAAGAAAAAAATTCTAGCTTTATTGATATAGCTGGGGCTGAACATAGTATGATGTGTGATATGGAATGTGATTTAGAACATATCGATGCGAACATAATCAATGAAAGAAAGATAAGAGTAGAAGGAAAACTAAGAACCAAGTACAGGGTTTATAAAGAAGAAAAAATAGATGTTGTTAAAGAATTAGATGGTTTAGGTGATTTACAAATAAAAAGAAAACCAGAAAGTATAGAGAAAAATATTACAAATATGGTTTGTTCAATGAGTGGAGAATTACCTATAAACGTAGGTATGGATAAACCTCAAATAGGAAAAATAATAAAATGTGGATATATGCTTCATAGACAAGAGATAAAATTAGGAGAAGATAAAGTACAAGCATCTTGCTTAGCTAAAATTAATGTTCTTTATAGAGCTTATGATTCTAGAGAAGTTGTAGCTTTAGAAGAGGATTTATATTTATCTAATGATGAAGAGGTTGTAGGTGTAAATTCAGATATGAATTGTAATGGATATTTTGAAATCAAAGGTCATGATGTGAAGATTTCTCAAAATGATTTAGGGGAAAGTAGAATAATAGATGTTAATTTATCTGTTGATGCAAATGTTGCAATATCAAAATTAGAATTTGCAGAAACAGTTGAGGACTTATATTCACCAACGCAAAATGTAATGCCTTTAAAGGAAGTTTGCAAGATTAATATGGCTGTTAGTGAAAATTCAAATGAATCAGTAATAAAAGGAAATATAGACTTAGGAAAAAATGGAGTAGATGCTACTCAAACAGTTGATTGTAAAGGTAAAATAGTAGATATGGAAAGCTATTTTATGGATCAAAAGGTTGTTATAAAGGGTAATTTATCTGTTGAATCAATATACAAGACAACTGATGAGGAAAAGGGACTTAATAAAGTAAGTGGAGAAATTCCTTTTGAAGTTGCTTTAGATATGCCAAATTCTCAGTCTGGTATGACTTTTGATACTAAGGCTAATTTAGAAGATTTACAATGTAGTATAGAAGGAAATAGCTTAGCAGTTAAAGCAGTAGTATATTTTTATGCTAAATGTTCAGATGTTTTTGATAAAGAATATGTTAAAGATATTGAACAAAATGATGACACTGTTGAAAAGAAAGCATCCATTACTATATACACAATTCAAAAAGGTGATACTTTGTGGAATTTAGCAAAAAAATATAAGACAACAATAGATACTTTAGTTAAATTAAATGATATAGAAGATCCAGATTCTATATATGCTGGCGATAAAATTATGATTCCAGGAAGAGCAGTTTTATAA
PROTEIN sequence
Length: 521
LVNLDIIKESLGFEKVLSENSLDIPFREEYLIPDTQPDVHDVLSVDTKVYVLNREVQSDRVLLEYEVECNIMYLAREEEGLGINSVIYKEKNSSFIDIAGAEHSMMCDMECDLEHIDANIINERKIRVEGKLRTKYRVYKEEKIDVVKELDGLGDLQIKRKPESIEKNITNMVCSMSGELPINVGMDKPQIGKIIKCGYMLHRQEIKLGEDKVQASCLAKINVLYRAYDSREVVALEEDLYLSNDEEVVGVNSDMNCNGYFEIKGHDVKISQNDLGESRIIDVNLSVDANVAISKLEFAETVEDLYSPTQNVMPLKEVCKINMAVSENSNESVIKGNIDLGKNGVDATQTVDCKGKIVDMESYFMDQKVVIKGNLSVESIYKTTDEEKGLNKVSGEIPFEVALDMPNSQSGMTFDTKANLEDLQCSIEGNSLAVKAVVYFYAKCSDVFDKEYVKDIEQNDDTVEKKASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIPGRAVL*