ggKbase home page

NECEvent2014_8_3_scaffold_31

Alias: 178_003_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_31_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96..1148
DNA (1053bp) protein (351aa)
Putative spore coat protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRQ6_CLOPF rbh
Putative spore coat protein {ECO:0000313|EMBL:EDT15599.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
cotS; spore coat protein
NECEvent2014_8_3_scaffold_31_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1111..1794
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RM06_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS79768.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_31_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1810..2838
DNA (1029bp) protein (343aa)
Putative spore coat protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRQ8_CLOPF rbh
Putative spore coat protein {ECO:0000313|EMBL:EDT15577.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str.
spore coat protein
NECEvent2014_8_3_scaffold_31_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3021..4148)
DNA (1128bp) protein (376aa)
Mannosyltransferase B n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TN93_CLOP1 rbh
mtfB; mannosyltransferase
Mannosyltransferase B {ECO:0000313|EMBL:EIA16225.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_31_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4203..5261
DNA (1059bp) protein (353aa)
Spore coat protein CotS n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BK78_CLOPF rbh
Spore coat protein CotS {ECO:0000313|EMBL:EDS79754.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
cotS; spore coat protein CotS
NECEvent2014_8_3_scaffold_31_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5461..6342
DNA (882bp) protein (294aa)
Peptidase family protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R746_CLOPF rbh
Peptidase family protein {ECO:0000313|EMBL:EDT23948.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
peptidase
NECEvent2014_8_3_scaffold_31_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6505..6741
DNA (237bp) protein (79aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=H7CYP0_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15572.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_31_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7101..8663
DNA (1563bp) protein (521aa)
LysM domain protein n=4 Tax=Clostridium perfringens RepID=Q0TN97_CLOP1 rbh
lysM domain-containing protein
LysM domain protein {ECO:0000313|EMBL:EDT27045.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.
NECEvent2014_8_3_scaffold_31_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8724..9590
DNA (867bp) protein (289aa)
cphB; cyanophycinase (EC:3.-.-.-)
Cyanophycinase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TN98_CLOP1 rbh
Cyanophycinase {ECO:0000313|EMBL:EIA16220.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_31_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9577..12201
DNA (2625bp) protein (875aa)
Cyanophycin synthetase {ECO:0000313|EMBL:EDT70979.1}; EC=6.-.-.- {ECO:0000313|EMBL:EDT70979.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Cyanophycin synthetase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V5E2_CLOPF rbh
cphA; cyanophycin synthetase
NECEvent2014_8_3_scaffold_31_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12337..13203
DNA (867bp) protein (289aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=6 Tax=Clostridium perfringens RepID=ISPE_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13273..13902
DNA (630bp) protein (210aa)
Stage II sporulation protein R n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNA1_CLOP1 rbh
stage II sporulation protein R
Stage II sporulation protein R {ECO:0000313|EMBL:EDS79798.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C st
NECEvent2014_8_3_scaffold_31_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13948..14928
DNA (981bp) protein (327aa)
Thiamin biosynthesis protein ThiI n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TNA2_CLOP1 rbh
thiamin biosynthesis protein ThiI
Thiamin biosynthesis protein ThiI {ECO:0000313|EMBL:EDT70966.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D
NECEvent2014_8_3_scaffold_31_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14951..15370
DNA (420bp) protein (140aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CYN3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15544.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_31_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15711..17318
DNA (1608bp) protein (536aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=8 Tax=Clostridium perfringens RepID=PYRG_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17582..19042
DNA (1461bp) protein (487aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=451755 specie
Transcription termination factor Rho n=8 Tax=Clostridium perfringens RepID=H7CYN1_CLOPF rbh
rho; transcription termination factor Rho
NECEvent2014_8_3_scaffold_31_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19085..20212)
DNA (1128bp) protein (376aa)
Putative monogalactosyldiacylglycerol synthase n=2 Tax=Clostridium perfringens RepID=Q0TNA6_CLOP1 rbh
monogalactosyldiacylglycerol synthase
Putative monogalactosyldiacylglycerol synthase {ECO:0000313|EMBL:EDT23993.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_3_scaffold_31_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20318..20524)
DNA (207bp) protein (69aa)
50S ribosomal protein L31 n=10 Tax=Clostridium perfringens RepID=RL31_CLOP1
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000255|HAMAP-Rule:MF_00501}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_3_scaffold_31_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20680..21279
DNA (600bp) protein (200aa)
tdk; thymidine kinase (EC:2.7.1.21)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=451754 species="Bacteria; Firmic
Thymidine kinase n=8 Tax=Clostridium perfringens RepID=H7CYM8_CLOPF rbh
NECEvent2014_8_3_scaffold_31_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21305..23068
DNA (1764bp) protein (588aa)
Protein-(Glutamine-N5) methyltransferase, release factor-specific n=2 Tax=Clostridium perfringens RepID=Q0TNA9_CLOP1 rbh
HemK family methyltransferase
Methyltransferase, HemK family {ECO:0000313|EMBL:EDT23998.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B st
NECEvent2014_8_3_scaffold_31_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23125..24207
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=11 Tax=Clostridium perfringens RepID=RF1_CLOP1 rbh
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
NECEvent2014_8_3_scaffold_31_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24286..24876
DNA (591bp) protein (197aa)
Uncharacterized protein n=8 Tax=Clostridium perfringens RepID=Q8XIC0_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15590.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_31_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24899..25951
DNA (1053bp) protein (351aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGD5_CLOPF rbh
Sua5/YciO/YrdC/YwlC family protein
NECEvent2014_8_3_scaffold_31_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26216..26665
DNA (450bp) protein (150aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EDT26948.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EDT26948.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Ribose-5-phosphate isomerase B n=8 Tax=Clostridium perfringens RepID=H7CYM2_CLOPF rbh
NECEvent2014_8_3_scaffold_31_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26710..27339
DNA (630bp) protein (210aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
Uracil phosphoribosyltransferase n=10 Tax=Clostridium perfringens RepID=UPP_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27403..28557
DNA (1155bp) protein (385aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDS79735.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EDS79735.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
UDP-N-acetylglucosamine 2-epimerase n=8 Tax=Clostridium perfringens RepID=H7CYM0_CLOPF rbh
NECEvent2014_8_3_scaffold_31_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28825..30003
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Putative acyltransferase {ECO:0000313|EMBL:EIA16201.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EIA16201.1};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Acetyl-CoA acetyltransferase n=5 Tax=Clostridium perfringens RepID=Q0TNB6_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_28
unknown

Not on your lists

30555..30710
DNA (156bp) protein (52aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_31_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30686..31042
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYL8_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16200.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_31_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31108..31782
DNA (675bp) protein (225aa)
atpB; ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a n=10 Tax=Clostridium perfringens RepID=H7CYL7_CLOPF rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
Displaying items 1-30 of 68 in total

View Taxonomy