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NECEvent2014_8_3_scaffold_31_16

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 17582..19042

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=451755 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 486.0
  • Bit_score: 946
  • Evalue 1.40e-272
Transcription termination factor Rho n=8 Tax=Clostridium perfringens RepID=H7CYN1_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 486.0
  • Bit_score: 947
  • Evalue 4.50e-273
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 486.0
  • Bit_score: 947
  • Evalue 1.70e-273

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1461
TTGAATATAGAACAATATGAAAATATGACTTTAGTTCAGCTAAAAGAGCAGGCTAAAGAATTAGGAATAAAAAATATAAGTAAAAAGAAAAAAAGCGAATTAATTGAGGAATTAAAAGCTGAATTCAATAAACAAAATAGCAATACTAAAGTAATACATAAAGATGGTGTTATTTTAAGAGAAAAAATATCTCAAAAAGAGCAAGGTGGAAATAAAGAAAGTTTTTCTGGTGAAAGAGTAGTTAGAAATAGCAATAATTATAATAACAATAATAGTAATTATAATAATTCAAATGATGAAGGAAAAAAAGAGCAATTAAAGGACATGATAAGTTCATCAGACTCTGCTAAGGGAATACTTGAAATACTAGATAATAATAATTTTGGTTTTTTAAGATGTAGAAATTATTTAACAAGTGAAGATGATATATATGTTTCTCCATCACAAATAAGAAGATTTGGATTAAGAACTGGGGACGAAGTCCAAGGTAAAGTTAGAATACCAAAGGATGGAGAAAAGTTTAAAGCTTTACTTTATGTAGAGAGAGTAAATGGTGAAAGTCCTGAAAAAGCAGTTGGAAGAAAAAAATTTGAAGAGTTAACACCAATATATCCAAAAGAGAGATTAAGACTTGAGACTGAAAATGGAAGAGATTTAAGTTCAAGACTTATGGATATAATTTGTCCAATAGGTAAGGGACAAAGGGGGATGATAGTTGCACCACCTAAGGCTGGAAAAACAACTCTTTTAAAAAGAATAGCTCAAAACATATCAAAAAATAATCCTGAAGTTAAACTTATAGTACTTTTAATAGATGAAAGACCAGAAGAAGTAACGGATATGAAGAGAAGTATAGATGGAGAAGTAATCTATTCAACTTTTGATGAAGAACCACAAAACCATGCTAAAGTTTCAAGTATAGTATTAGAAAGAGCTAAAAGAATGGTTGAACAAGGAAGAGATGTAGTTATCTTAATGGATTCTTTAACAAGATTATCAAGAGCCTATAACTTAACAGTTACTCCATCTGGAAGAACTTTATCAGGGGGACTAGATCCAGGGGCGCTTATAATGCCTAAGAAATTCTTTGGAGCAGCTAGAAATTTAGAAGAGGGCGGAAGTTTAACAATTTTAGCAACTTCTTTAGTTGATACAGGAAGTAGAATGGATGATATGATTTTTGAAGAGTTTAAGGGTACTGGAAATATGGAGGTACACTTAGATAGAAAGCTTCAAGAGAGAAGAATATTCCCAGCTATAGATATTTATAAATCTGGTACTAGAAAAGAAGATTTATTATTTAATGAAGAAGAAAGAGAAGCTTCATATAAAATAAGAAGAGTATTACAAAAGGAAAATAATATAGAGGATGTAGCTGAAAAGCTTATAAATTTATTATCAAAAACAAAAAATAATAAAGAGTTTTTACAAGTTGTTTTAAAAAGCAATTTAGAAAATTAA
PROTEIN sequence
Length: 487
LNIEQYENMTLVQLKEQAKELGIKNISKKKKSELIEELKAEFNKQNSNTKVIHKDGVILREKISQKEQGGNKESFSGERVVRNSNNYNNNNSNYNNSNDEGKKEQLKDMISSSDSAKGILEILDNNNFGFLRCRNYLTSEDDIYVSPSQIRRFGLRTGDEVQGKVRIPKDGEKFKALLYVERVNGESPEKAVGRKKFEELTPIYPKERLRLETENGRDLSSRLMDIICPIGKGQRGMIVAPPKAGKTTLLKRIAQNISKNNPEVKLIVLLIDERPEEVTDMKRSIDGEVIYSTFDEEPQNHAKVSSIVLERAKRMVEQGRDVVILMDSLTRLSRAYNLTVTPSGRTLSGGLDPGALIMPKKFFGAARNLEEGGSLTILATSLVDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRIFPAIDIYKSGTRKEDLLFNEEEREASYKIRRVLQKENNIEDVAEKLINLLSKTKNNKEFLQVVLKSNLEN*