ggKbase home page

NECEvent2014_8_3_scaffold_31

Alias: 178_003_scaffold_31

Search features with annotation key words

Displaying items 31-60 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_31_31
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31843..32061
DNA (219bp) protein (73aa)
ATP synthase subunit c n=10 Tax=Clostridium perfringens RepID=ATPL_CLOP1
atpL; ATP synthase F0F1 subunit C
ATP synthase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; ATP synthase F(0) sector subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; F-type ATPase subunit c {ECO:0000255|HAMAP-Rule:MF_01396}; Short=F-ATPas
NECEvent2014_8_3_scaffold_31_32
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32161..32640
DNA (480bp) protein (160aa)
atpF; ATP synthase F0F1 subunit B (EC:3.6.3.14)
ATP synthase subunit b n=10 Tax=Clostridium perfringens RepID=ATPF_CLOP1
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398, ECO:0000256|RuleBase:RU003849}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:
NECEvent2014_8_3_scaffold_31_33
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32643..33182
DNA (540bp) protein (180aa)
atpH; ATP synthase F0F1 subunit delta (EC:3.6.3.14)
ATP synthase subunit delta n=7 Tax=Clostridium perfringens RepID=ATPD_CLOP1 rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
NECEvent2014_8_3_scaffold_31_34
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33193..34701
DNA (1509bp) protein (503aa)
atpA; ATP synthase F0F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=9 Tax=Clostridium perfringens RepID=ATPA_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_35
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34766..35617
DNA (852bp) protein (284aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=11 Tax=Clostridium perfringens RepID=ATPG_CLOP1 rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=4517
NECEvent2014_8_3_scaffold_31_36
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35631..37028
DNA (1398bp) protein (466aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=10 Tax=Clostridium perfringens RepID=ATPB_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_37
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37044..37445
DNA (402bp) protein (134aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain n=9 Tax=Clostridium perfringens RepID=ATPE_CLOP1
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
NECEvent2014_8_3_scaffold_31_38
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37627..38271
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BKA8_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT15642.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_31_39
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38294..39559
DNA (1266bp) protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Clostridium perfringens RepID=B1BKA9_CLOPF rbh
NECEvent2014_8_3_scaffold_31_40
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39671..40693
DNA (1023bp) protein (341aa)
Stage II sporulation protein D n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XID8_CLOPE rbh
spoIID; stage II sporulation protein D
Stage II sporulation protein D {ECO:0000313|EMBL:BAB81889.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_8_3_scaffold_31_41
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40810..41580
DNA (771bp) protein (257aa)
Putative peptidase n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SR00_CLOPS rbh
peptidase
Putative peptidase {ECO:0000313|EMBL:ABG86453.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 /
NECEvent2014_8_3_scaffold_31_42
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41656..41937
DNA (282bp) protein (94aa)
Stage III sporulation protein D n=11 Tax=Clostridium perfringens RepID=H7CYK5_CLOPF
spoIIID; stage III sporulation protein D
Stage III sporulation protein D {ECO:0000313|EMBL:EDT73150.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D s
NECEvent2014_8_3_scaffold_31_43
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41998..43035
DNA (1038bp) protein (346aa)
Cell shape determining protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIE1_CLOPE rbh
mreV; rod shape-determining protein Mbl
Cell shape determining protein {ECO:0000313|EMBL:BAB81886.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str
NECEvent2014_8_3_scaffold_31_44
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43074..43604)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIE2_CLOPE rbh
sporulation protein YyaC
Uncharacterized protein {ECO:0000313|EMBL:BAB81885.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_31_45
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43710..44354
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=B1BKB6_CLOPF rbh
Uncharacterized protein {ECO:0000313|EMBL:EDT15602.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_8_3_scaffold_31_46
unknown

Not on your lists

comp(44465..45052)
DNA (588bp) protein (196aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_31_trna_1
unknown

Not on your lists

44519..44591
DNA (73bp)
transferRNA
NECEvent2014_8_3_scaffold_31_trna_2
unknown

Not on your lists

44600..44682
DNA (83bp)
transferRNA
NECEvent2014_8_3_scaffold_31_trna_3
unknown

Not on your lists

44690..44762
DNA (73bp)
transferRNA
NECEvent2014_8_3_scaffold_31_trna_4
unknown

Not on your lists

44784..44856
DNA (73bp)
transferRNA
NECEvent2014_8_3_scaffold_31_trna_5
unknown

Not on your lists

44865..44947
DNA (83bp)
transferRNA
NECEvent2014_8_3_scaffold_31_trna_6
unknown

Not on your lists

44976..45048
DNA (73bp)
transferRNA
NECEvent2014_8_3_scaffold_31_trna_7
unknown

Not on your lists

45057..45139
DNA (83bp)
transferRNA
NECEvent2014_8_3_scaffold_31_47
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45573..46748
DNA (1176bp) protein (392aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
S-adenosylmethionine synthase n=9 Tax=Clostridium perfringens RepID=METK_CLOP1 rbh
NECEvent2014_8_3_scaffold_31_48
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46885..48021)
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=451756 species=
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=3 Tax=Clostridium perfringens RepID=B1BKB9_CLOPF rbh
NECEvent2014_8_3_scaffold_31_49
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48158..50392
DNA (2235bp) protein (745aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Helicase, RecD/TraA family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRV0_CLOPF rbh
recD; RecD/TraA family helicase
NECEvent2014_8_3_scaffold_31_50
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50410..51372
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XIE7_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB81880.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_31_51
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51348..52007
DNA (660bp) protein (220aa)
ComF protein, homolog n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RGG0_CLOPF rbh
ComF protein, homolog {ECO:0000313|EMBL:EDT27017.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F496
competence protein FC
NECEvent2014_8_3_scaffold_31_52
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52459..52998
DNA (540bp) protein (180aa)
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF rbh
raiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_3_scaffold_31_53
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53234..55756
DNA (2523bp) protein (841aa)
Protein translocase subunit SecA n=4 Tax=Clostridium perfringens RepID=SECA_CLOP1 rbh
secA; preprotein translocase subunit SecA
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Displaying items 31-60 of 68 in total

View Taxonomy