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NECEvent2014_8_3_scaffold_31_52

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 52459..52998

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=8 Tax=Clostridium perfringens RepID=H7CYJ6_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 355
  • Evalue 3.70e-95
  • rbh
raiA; ribosomal subunit interface protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 355
  • Evalue 1.00e-95
Ribosomal subunit interface protein {ECO:0000313|EMBL:EIA16374.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 355
  • Evalue 5.10e-95

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGAAAGTAACAGTACATGCTAAGAATATAGAGTTAACAAATGCTTTAAAGGATTGTGTAGAAAAGAAAATATCCAAGTTAAGCAAGTATTTTGAACCAGGAGTTGAAGCAAAGGCCACTTTAAGCGTAGAGAAAAATAAACAAATCATAGAAGTTATGATTCCTTTTAATGGAATATTATTAAGAGGTGAAGAATCTACAGACGATATGTATAAGTCAATAGACTTAGTTGAAGAAAAAATCGAAAGACAAATAAGAAAACAAAAAACTAGATTATCAAAGAAAAATAGATATGATTCATTAAGATTTGCTCATATAGATCCAATAGAGGATATGAAAGAAGAAAAAGAAGCAAAAATAGTAAAAACTAAAAGATTTGATGTTAAGCCAATGGGAGCTGAAGAGGCAGTTTTACAAATGGAGCTTATAGGACATGACTTCTTTGTATTCCAAGATCCAGAGACAAATCAACTAAATGTAGTTTATAAAAGAAAAGATGGTAATTATGGTTTAATTGAACCAGGATTAGGCGAAGAATAA
PROTEIN sequence
Length: 180
MKVTVHAKNIELTNALKDCVEKKISKLSKYFEPGVEAKATLSVEKNKQIIEVMIPFNGILLRGEESTDDMYKSIDLVEEKIERQIRKQKTRLSKKNRYDSLRFAHIDPIEDMKEEKEAKIVKTKRFDVKPMGAEEAVLQMELIGHDFFVFQDPETNQLNVVYKRKDGNYGLIEPGLGEE*