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NECEvent2014_8_3_scaffold_160_15

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(19212..20096)

Top 3 Functional Annotations

Value Algorithm Source
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133) similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 294.0
  • Bit_score: 596
  • Evalue 3.30e-168
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens F262 RepID=H7CT57_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 600
  • Evalue 1.10e-168
  • rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIA17859.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 600
  • Evalue 1.50e-168

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGAAAATATTAATAACAGGTTCAAATGGACAATTAGGAAATGAACTTCAATCAATAATAAAAAGTGGAAAAGCAGAAATAGGTTCAGTTAGTGAAAATATAAAAAACTCAGAAGTTATTGCTTTAGATGTTGATAAATTAGATATAACTAGCTTAGAAAATGTTAAAAATGTACTTAATGAAGAAAAGCCAGATGTAGTAATAAACTGTGCAGCGGCAACAAATGTTGACGGATGTGAAAGTAATGAAGATTTTGCATTTAAAGTTAATTCTTTAGGAGCAAGAAATTTAGCTATGGTTTGTGAAGAAATTGGAGCTAAATTAGTTCAAGTTTCAACAGATTATGTATTTAGTGGTGTTGGTGAAAAACCATTAACTGAGTTTGATTTAACTGCACCTTATAGTGTTTACGGAAAAACAAAACTTTTAGGTGAAAATTATGTTAAAGAGTTTTGTTCAAAATATTATATAGTTAGAACTGCTTGGTTATATGGATATGTGGGACATAACTTTGTTTACACAATGATGAGACTTGGAAAAGAAAAAGAATCATTAAATGTAGTTAATGATCAAAAAGGAAATCCAACTCACGCAAATGATTTAGTATATCATATATTAAAGCTTATAGAAACAGAAGAATACGGAATATACCATTGTACAGGAAAAGGGGAATGTACTTGGTATGATTTTGCTAAAGAAATAATGGAGTTAGCTGGCAATAAGTGCATTGTTAATCCATGTACTTCAGAAGAATATAAAACACCAGCTAAAAGACCAGAATATTCATCATTAGATAATATGATGCTTAGATGTACAATTGGTGATGAAATGAGAGATTGGAAGGAAGCTTTAAAAAGCTTTTTTAAAAATCAACAAAATCAATAA
PROTEIN sequence
Length: 295
MKILITGSNGQLGNELQSIIKSGKAEIGSVSENIKNSEVIALDVDKLDITSLENVKNVLNEEKPDVVINCAAATNVDGCESNEDFAFKVNSLGARNLAMVCEEIGAKLVQVSTDYVFSGVGEKPLTEFDLTAPYSVYGKTKLLGENYVKEFCSKYYIVRTAWLYGYVGHNFVYTMMRLGKEKESLNVVNDQKGNPTHANDLVYHILKLIETEEYGIYHCTGKGECTWYDFAKEIMELAGNKCIVNPCTSEEYKTPAKRPEYSSLDNMMLRCTIGDEMRDWKEALKSFFKNQQNQ*