ggKbase home page

NECEvent2014_8_3_scaffold_160

Alias: 178_003_scaffold_160

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_160_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..1241
DNA (1239bp) protein (413aa)
Branched-chain amino acid transport system II carrier protein n=5 Tax=Clostridium perfringens RepID=Q0TTH4_CLOP1 rbh
brnQ; branched-chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EDT22299.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_8_3_scaffold_160_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1518..2537
DNA (1020bp) protein (340aa)
Putative transcriptional regulator n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TTH5_CLOP1 rbh
transcriptional regulator
Probable PBP5 synthesis regulator protein {ECO:0000313|EMBL:BAB80337.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfr
NECEvent2014_8_3_scaffold_160_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2656..3948
DNA (1293bp) protein (431aa)
Cell wall binding repeat protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RBV2_CLOPF rbh
Cell wall binding repeat protein {ECO:0000313|EMBL:EDT22291.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B
cell wall binding repeat-containing protein
NECEvent2014_8_3_scaffold_160_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4067..4750)
DNA (684bp) protein (228aa)
Nucleotidyl transferase family protein n=2 Tax=Clostridium perfringens RepID=Q0TTH7_CLOP1 rbh
licC; lic-1 operon protein
Probable lic-1 operon protein {ECO:0000313|EMBL:BAB80335.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra
NECEvent2014_8_3_scaffold_160_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4897..5865)
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC1_CLOPF rbh
Lic-1 operon protein {ECO:0000313|EMBL:EIA17870.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
licB; lic-1 operon protein
NECEvent2014_8_3_scaffold_160_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5891..7759)
DNA (1869bp) protein (623aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNC0_CLOPF rbh
Transcriptional regulator, MarR family/choline/ethanolamine kinase {ECO:0000313|EMBL:EDT14534.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
licA; choline kinase
NECEvent2014_8_3_scaffold_160_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7964..9328)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMR2_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80332.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_160_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9530..11182)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMR3_CLOPE rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAB80331.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_160_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11312..13735)
DNA (2424bp) protein (808aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB5_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80330.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_160_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13757..15208)
DNA (1452bp) protein (484aa)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium perfringens RepID=B1BF15_CLOPF rbh
capsular polysaccharide synthesis protein
Probable capsular polysaccharide synthesis protein {ECO:0000313|EMBL:BAB80329.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_8_3_scaffold_160_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15217..15957)
DNA (741bp) protein (247aa)
Conserved domain protein n=5 Tax=Clostridium perfringens RepID=Q0TTI4_CLOP1 rbh
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT22332.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATC
NECEvent2014_8_3_scaffold_160_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16051..16899)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNB2_CLOPF rbh
glycosyl transferase family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDT22329.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_8_3_scaffold_160_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16896..18110)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=Q8XMR8_CLOPE rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT22327.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. AT
NECEvent2014_8_3_scaffold_160_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18135..19184)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
rfbB; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=3 Tax=Clostridium perfringens RepID=B1BF11_CLOPF rbh
NECEvent2014_8_3_scaffold_160_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19212..20096)
DNA (885bp) protein (295aa)
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Clostridium perfringens F262 RepID=H7CT57_CLOPF rbh
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIA17859.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
NECEvent2014_8_3_scaffold_160_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20110..20679)
DNA (570bp) protein (190aa)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EDT27840.1}; EC=5.1.3.13 {ECO:0000313|EMBL:EDT27840.1};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=Clostridium perfringens RepID=H7CT56_CLOPF rbh
NECEvent2014_8_3_scaffold_160_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20785..21666)
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Glucose-1-phosphate thymidylyltransferase n=2 Tax=Clostridium perfringens RepID=Q0TTJ0_CLOP1 rbh
rfbA; glucose-1-phosphate thymidylyltransferase
NECEvent2014_8_3_scaffold_160_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21717..22628)
DNA (912bp) protein (304aa)
Glycosyl transferase, group 2 family protein n=3 Tax=Clostridium perfringens RepID=H7CT54_CLOPF rbh
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EIA17856.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
glycosyl transferase family protein
NECEvent2014_8_3_scaffold_160_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22629..23291)
DNA (663bp) protein (221aa)
Sugar transferase family protein n=6 Tax=Clostridium perfringens RepID=H7CT53_CLOPF rbh
sugar transferase
Probable undecaprenyl phosphate galactosephosphotransferase {ECO:0000313|EMBL:BAB80320.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_3_scaffold_160_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23332..24132)
DNA (801bp) protein (267aa)
Phosphatase YidA {ECO:0000313|EMBL:EDT14509.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDT14509.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
HAD family hydrolase n=7 Tax=Clostridium perfringens RepID=H7CT52_CLOPF rbh
HAD family hydrolase
NECEvent2014_8_3_scaffold_160_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24508..25113
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CT51_CLOPF rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80318.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_160_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25327..26922
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=10 Tax=Clostridium perfringens RepID=H7CT50_CLOPF rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=883064 species="Bacteria; Firmicutes; Clostridia;
prfC; peptide chain release factor 3
NECEvent2014_8_3_scaffold_160_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27184..30510
DNA (3327bp) protein (1109aa)
Membrane protein, MmpL family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BUT9_CLOPF rbh
Membrane protein, MmpL family {ECO:0000313|EMBL:EDT14525.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str
hypothetical protein
NECEvent2014_8_3_scaffold_160_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30715..31554)
DNA (840bp) protein (280aa)
HAD hydrolase, IIB family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RSU0_CLOPF rbh
HAD family hydrolase
Uncharacterized protein {ECO:0000313|EMBL:BAB80315.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_160_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31946..32140
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SVE5_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG86116.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
Displaying 25 items

View Taxonomy