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NECEvent2014_8_3_scaffold_378_12

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(8856..9671)

Top 3 Functional Annotations

Value Algorithm Source
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 271.0
  • Bit_score: 540
  • Evalue 3.40e-151
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=195103 species="Bacteria; Firmi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 271.0
  • Bit_score: 540
  • Evalue 1.70e-150
Shikimate dehydrogenase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=AROE_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 271.0
  • Bit_score: 541
  • Evalue 5.40e-151
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 816
TTGAAGTTATTTGGATTAATAGGTGAGAAGTTAGGACATAGTTTATCTCCAGAGATACATAATAAAGTTTTTAAAGATAATAATATAGATGGATTATATAATCTTTTTTCTGTAAAAAAAGATTTTGAAAATAATATTGTAGAAAGTCTAAAATGCTTAGGAGTAAAGGGAGCCAATGTTACAATACCATATAAAGAGAAGGTTATGGATCAGCTAGATATTATTTCACATGAGGCCAAAGCTATAGGAGCAGTAAATACTATTTTAATAAAAGATGGAAAATCCTATGGTTATAACACTGATTATTATGGATTTGGTAAAATGCTAGAAAGAGCAAAGGTTAATATTGAAGGAAATAGCTTTTTTGTTTTAGGAGCAGGAGGGGCTGCTAGAAGTATTTTAAAATATTTAGAGGACAGCAAAGCTAAAAAAATAGTTTTGGTTTCTAGGGATAGAGAGAAAGCTTTTAAAAAATTTAAAGATTTCAATATTAATTTTATGAGTTATGGTGAGCTTGAAGAAATTAATGAAGAGTTTGCGTTAATCAATACAACTCCCTGTGGAATGTATCCTAATATAAATTCAGTAGCTGTTTCAGAAAAGGTAATTAAAAAGTTTAAGGTTGCTGTGGATATAGTTTATAATCCTTTAGAAACTAAGTTTTTAAAGATGGCTAAGGACAATGGTCTTAAAACGGTGGATGGATTATTTATGTTAGTTGGACAAGGGGTTAAAGCTGAAGAGATTTGGAATGGAATAAAAGTAGATAAGTCTACAGAAGAAGATATATATGAAGAATTGAAATGTAGATTTTAA
PROTEIN sequence
Length: 272
LKLFGLIGEKLGHSLSPEIHNKVFKDNNIDGLYNLFSVKKDFENNIVESLKCLGVKGANVTIPYKEKVMDQLDIISHEAKAIGAVNTILIKDGKSYGYNTDYYGFGKMLERAKVNIEGNSFFVLGAGGAARSILKYLEDSKAKKIVLVSRDREKAFKKFKDFNINFMSYGELEEINEEFALINTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAKDNGLKTVDGLFMLVGQGVKAEEIWNGIKVDKSTEEDIYEELKCRF*