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NECEvent2014_8_3_scaffold_378

Alias: 178_003_scaffold_378

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_378_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22..1233)
DNA (1212bp) protein (404aa)
Putative lipoprotein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT84_CLOP1 rbh
hypothetical protein
ABC-2 type transport system permease protein {ECO:0000313|EMBL:EIA17961.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pe
NECEvent2014_8_3_scaffold_378_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1235..2125)
DNA (891bp) protein (297aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT85_CLOP1 rbh
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT16576.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen
NECEvent2014_8_3_scaffold_378_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2251..2433)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTF7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17959.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
NECEvent2014_8_3_scaffold_378_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2598..3092)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT87_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16594.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
NECEvent2014_8_3_scaffold_378_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3304..4161)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XMI3_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80411.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
NECEvent2014_8_3_scaffold_378_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4163..4495)
DNA (333bp) protein (111aa)
30S ribosomal protein homolog n=3 Tax=Clostridium perfringens RepID=Q8XMI4_CLOPE
30S ribosomal protein
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EDT16416.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfring
NECEvent2014_8_3_scaffold_378_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4622..5137)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TT90_CLOP1 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24141.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC
NECEvent2014_8_3_scaffold_378_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5874..6980)
DNA (1107bp) protein (369aa)
Oxidoreductase, FAD/FMN-binding n=2 Tax=Clostridium perfringens RepID=Q0TT91_CLOP1 rbh
FAD/FMN-binding oxidoreductase
Oxidoreductase, FAD/FMN-binding {ECO:0000313|EMBL:EDT73081.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D s
NECEvent2014_8_3_scaffold_378_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7236..7577
DNA (342bp) protein (114aa)
Putative transcriptional regulator n=2 Tax=Clostridium perfringens RepID=Q0TT92_CLOP1
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:EDT24157.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens
NECEvent2014_8_3_scaffold_378_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7598..8032)
DNA (435bp) protein (145aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|H
3-dehydroquinate dehydratase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=AROQ_CLOP1
NECEvent2014_8_3_scaffold_378_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8099..8602)
DNA (504bp) protein (168aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia;
Shikimate kinase n=2 Tax=Clostridium perfringens RepID=Q0TT94_CLOP1 rbh
NECEvent2014_8_3_scaffold_378_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8856..9671)
DNA (816bp) protein (272aa)
aroE; shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=195103 species="Bacteria; Firmi
Shikimate dehydrogenase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=AROE_CLOP1 rbh
NECEvent2014_8_3_scaffold_378_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10493..10786)
DNA (294bp) protein (98aa)
Chorismate mutase n=3 Tax=Clostridium perfringens RepID=H7CTE9_CLOPF
Chorismate mutase {ECO:0000313|EMBL:EIA17951.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
chorismate mutase
NECEvent2014_8_3_scaffold_378_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10954..12027)
DNA (1074bp) protein (358aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R6J2_CLOPF rbh
NECEvent2014_8_3_scaffold_378_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12090..13364)
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BL40_CLOPF rbh
NECEvent2014_8_3_scaffold_378_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13613..14665)
DNA (1053bp) protein (351aa)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
3-dehydroquinate synthase n=2 Tax=Clostridium perfringens RepID=AROB_CLOPE rbh
aroB; 3-dehydroquinate synthase rbh
NECEvent2014_8_3_scaffold_378_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14762..15775)
DNA (1014bp) protein (338aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ABG86834.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ABG86834.1};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNJ8_CLOPF rbh
NECEvent2014_8_3_scaffold_378_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15941..16072)
DNA (132bp) protein (44aa)
Uncharacterized protein n=5 Tax=Clostridium perfringens RepID=H7CTE4_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA17946.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
NECEvent2014_8_3_scaffold_378_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16247..19648)
DNA (3402bp) protein (1134aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q8XMJ5_CLOPE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB80399.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Displaying 19 items

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