ggKbase home page

NECEvent2014_8_3_scaffold_343

Alias: 178_003_scaffold_343

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_343_1
unknown

Not on your lists

comp(89..610)
DNA (522bp) protein (174aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_343_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

699..1379
DNA (681bp) protein (227aa)
sdaAB; L-serine dehydratase, iron-sulfur-dependent, beta subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Clostridium colicanis 209318 RepID=N9Y474_9CLOT rbh
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:ENZ02617.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="C
NECEvent2014_8_3_scaffold_343_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1379..2260
DNA (882bp) protein (294aa)
sdaAA; L-serine dehydratase, alpha chain (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QJR7_9CLOT rbh
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EKY28191.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_8_3_scaffold_343_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2643..3146
DNA (504bp) protein (168aa)
Putative ThiW protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ETJ5_9CLOT
Putative ThiW protein {ECO:0000313|EMBL:CDG02550.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
thiW; thiamine-precursor transport protein ThiW
NECEvent2014_8_3_scaffold_343_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3196..4956
DNA (1761bp) protein (587aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.4.12)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AIY84515.1}; EC=3.6.4.12 {ECO:0000313|EMBL:AIY84515.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium colicanis 209318 RepID=N9XSE4_9CLOT rbh
NECEvent2014_8_3_scaffold_343_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5090..5296)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG22_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97803.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
small acid-soluble spore protein, alpha/beta type
NECEvent2014_8_3_scaffold_343_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5597..7525
DNA (1929bp) protein (643aa)
Putative Non-specific serine/threonine protein kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP89_9CLOT rbh
Putative Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:CDG02544.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
prkA AAA domain protein
NECEvent2014_8_3_scaffold_343_8
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7526..8698
DNA (1173bp) protein (391aa)
UPF0229 protein CCH01_018370 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FBW1_9CLOT rbh
UPF0229 protein CCH01_018370 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
yhbH; sporulation protein YhbH
NECEvent2014_8_3_scaffold_343_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8701..10083
DNA (1383bp) protein (461aa)
Stage V sporulation protein R n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BUE1_9CLOT rbh
Stage V sporulation protein R {ECO:0000313|EMBL:EOR20300.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
stage V sporulation protein R
NECEvent2014_8_3_scaffold_343_10
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10135..10671
DNA (537bp) protein (179aa)
Rubrerythrin n=2 Tax=Clostridium butyricum RepID=M8JHP3_CLOBU
rubrerythrin family protein
Rubrerythrin {ECO:0000313|EMBL:KJZ85552.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_8_3_scaffold_343_11
Ixodes ricinus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

10686..11135
DNA (450bp) protein (150aa)
Putative retrotransposon-like 1 n=1 Tax=Ixodes ricinus RepID=V5HRR7_IXORI
Putative retrotransposon-like 1 {ECO:0000313|EMBL:JAB76748.1}; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodid
hypothetical protein
NECEvent2014_8_3_scaffold_343_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11250..11579
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A6LQX8_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR32758.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
NECEvent2014_8_3_scaffold_343_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11639..12160)
DNA (522bp) protein (174aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:AGF58887.1}; EC=2.7.8.8 {ECO:0000313|EMBL:AGF58887.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N653_9CLOT
NECEvent2014_8_3_scaffold_343_14
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12365..13243
DNA (879bp) protein (293aa)
Diacylglycerol kinase, catalytic region n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY0_CLOB8
putative lipid kinase
Diacylglycerol kinase, catalytic region {ECO:0000313|EMBL:ABR32760.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijeri
NECEvent2014_8_3_scaffold_343_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13296..13949
DNA (654bp) protein (218aa)
Putative membrane protein n=2 Tax=Clostridium botulinum B RepID=B2TPZ3_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD25014.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Ekl
NECEvent2014_8_3_scaffold_343_16
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14044..15978)
DNA (1935bp) protein (645aa)
UPF0313 protein Cbei_0575 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LQY2_CLOB8
hypothetical protein
UPF0313 protein Cbei_0575 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (str
NECEvent2014_8_3_scaffold_343_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16322..17584
DNA (1263bp) protein (421aa)
membrane protein n=1 Tax=Clostridium botulinum RepID=UPI0002E72F1A
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:AIY80185.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
NECEvent2014_8_3_scaffold_343_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18082..18990
DNA (909bp) protein (303aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Putative Cysteine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FP81_9CLOT rbh
cysteine synthase
NECEvent2014_8_3_scaffold_343_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19017..19601
DNA (585bp) protein (195aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
Serine acetyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TPY8_CLOBB
NECEvent2014_8_3_scaffold_343_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19605..20594
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMX1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDG02532.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
iron-sulfur cluster-binding protein
NECEvent2014_8_3_scaffold_343_21
Listeria aquatica, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20644..20952)
DNA (309bp) protein (103aa)
PadR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI0002894AB7
PadR family transcriptional regulator {ECO:0000313|EMBL:EUJ17456.1}; TaxID=1265818 species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria aquatica FSL S10-1188.
PadR family transcriptional regulator
Displaying 21 items

View Taxonomy