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NECEvent2014_8_3_scaffold_541

Alias: 178_003_scaffold_541

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_541_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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41..502
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R166_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55568.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_3_scaffold_541_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

499..1203
DNA (705bp) protein (235aa)
Glycoprotease n=1 Tax=Clostridium sp. CAG:221 RepID=R6FY95_9CLOT rbh
yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ
tRNA threonylcarbamoyl adenosine modification protein YeaZ {ECO:0000313|EMBL:AIY83927.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_8_3_scaffold_541_3
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1196..1636
DNA (441bp) protein (147aa)
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Putative ribosomal-protein-alanine acetyltransferase RimI {ECO:0000313|EMBL:AGF54502.1}; EC=2.3.1.128 {ECO:0000313|EMBL:AGF54502.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridia
Putative ribosomal-protein-alanine acetyltransferase RimI n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSD9_9CLOT
NECEvent2014_8_3_scaffold_541_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1841..2443)
DNA (603bp) protein (201aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6M1P4_CLOB8
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AJH01480.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP
NECEvent2014_8_3_scaffold_541_5
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2583..3236
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B7W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85411.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
Crp family transcriptional regulator
NECEvent2014_8_3_scaffold_541_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3276..4976)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H336_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97311.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
pyridine nucleotide-disulfide oxidoreductase family protein
NECEvent2014_8_3_scaffold_541_7
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4990..5310)
DNA (321bp) protein (107aa)
Rhodanese domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SPJ4_CLOC7
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ADL50043.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain
NECEvent2014_8_3_scaffold_541_8
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5447..5647
DNA (201bp) protein (67aa)
4Fe-4S ferredoxin n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAZ7_9CLOT
4Fe-4S ferredoxin {ECO:0000313|EMBL:EOR26487.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
4Fe-4S ferredoxin
NECEvent2014_8_3_scaffold_541_9
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5647..6231
DNA (585bp) protein (195aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CV87_CLOSO rbh
Membrane protein {ECO:0000313|EMBL:KEZ85727.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_8_3_scaffold_541_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6474..7202)
DNA (729bp) protein (243aa)
UPI0003D69653 related cluster n=1 Tax=unknown RepID=UPI0003D69653
DeoR-family transcriptional regulator {ECO:0000313|EMBL:ETI87910.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricu
DeoR-family transcriptional regulator
NECEvent2014_8_3_scaffold_541_11
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7414..7896)
DNA (483bp) protein (161aa)
phosphinothricin N-acetyltransferase (EC:2.3.1.-)
Phosphinothricin N-acetyltransferase (PPT N-acetyltransferase) (Phosphinothricin-resistance protein) n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YP84_TREPZ
Tax=BJP_IG2069_Syntrophobacterales_47_18
NECEvent2014_8_3_scaffold_541_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7970..9301)
DNA (1332bp) protein (444aa)
NADH oxidase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QA62_9CLOT
NADH oxidase {ECO:0000313|EMBL:EKY24620.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_8_3_scaffold_541_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9431..10030)
DNA (600bp) protein (200aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Clostridium difficile CD160 RepID=T3DC17_CLODI
mobA-like NTP transferase domain protein
NECEvent2014_8_3_scaffold_541_14
unknown

Not on your lists

comp(9984..10415)
DNA (432bp) protein (144aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_541_15
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10532..11755)
DNA (1224bp) protein (408aa)
Nitrate reductase NADH oxidase subunit n=2 Tax=environmental samples RepID=R6FTM2_9CLOT rbh
Nitrate reductase NADH oxidase subunit {ECO:0000313|EMBL:CDB15425.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sour
noxA; nitrate reductase, NADH oxidase subunit
NECEvent2014_8_3_scaffold_541_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11752..12168)
DNA (417bp) protein (139aa)
Nitrate reductase electron transfer subunit n=1 Tax=Clostridium perfringens F262 RepID=H7CXJ1_CLOPF
narB; nitrate reductase electron transfer subunit
Nitrate reductase electron transfer subunit {ECO:0000313|EMBL:EIA16646.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium per
NECEvent2014_8_3_scaffold_541_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12182..14284)
DNA (2103bp) protein (701aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HDQ7_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH97578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
narA; nitrate reductase, catalytic subunit
NECEvent2014_8_3_scaffold_541_18
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14531..14683
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WKY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03545.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_8_3_scaffold_541_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14775..14891)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XH86_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB82305.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13
Displaying 19 items

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