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NECEvent2014_8_3_scaffold_566

Alias: 178_003_scaffold_566

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_566_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..697)
DNA (696bp) protein (232aa)
MiaB-like tRNA modifying protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C9Z3_9CLOT
MiaB/RimO family radical SAM methylthiotransferase {ECO:0000313|EMBL:EEH98823.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
MiaB-like tRNA modifying protein
NECEvent2014_8_3_scaffold_566_2
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(697..1458)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
rsmE; ribosomal RNA small subunit methyltransferase E (EC:2.1.1.193)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EPZ0_9CLOT rbh
NECEvent2014_8_3_scaffold_566_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1475..2416)
DNA (942bp) protein (314aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FL09_9CLOT rbh
prmA; ribosomal protein L11 methyltransferase
NECEvent2014_8_3_scaffold_566_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2540..4084)
DNA (1545bp) protein (515aa)
Putative Nitrite/sulfite reductase ferredoxin domain protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EJA6_9CLOT rbh
Putative Nitrite/sulfite reductase ferredoxin domain protein {ECO:0000313|EMBL:CDG01332.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
ferredoxin-nitrite reductase
NECEvent2014_8_3_scaffold_566_5
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4246..5373)
DNA (1128bp) protein (376aa)
Chaperone protein DnaJ n=1 Tax=Clostridium sp. CAG:221 RepID=R6FU95_9CLOT rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmen
dnaJ; chaperone protein DnaJ
NECEvent2014_8_3_scaffold_566_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5472..7331)
DNA (1860bp) protein (620aa)
Chaperone protein DnaK n=1 Tax=Clostridium colicanis 209318 RepID=N9Y239_9CLOT rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; chaperone protein DnaK
NECEvent2014_8_3_scaffold_566_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7396..8010)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HG08_9CLOT
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
grpE; heat shock protein GrpE
NECEvent2014_8_3_scaffold_566_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8040..9071)
DNA (1032bp) protein (344aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q561_9CLOT rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
hrcA; heat-inducible transcription repressor HrcA
NECEvent2014_8_3_scaffold_566_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9245..10369)
DNA (1125bp) protein (375aa)
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V4_9CLOT rbh
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EEH98832.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
NECEvent2014_8_3_scaffold_566_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10425..10862)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H586_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99578.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_3_scaffold_566_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10947..11216)
DNA (270bp) protein (90aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SRD9_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG87598.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM1
NECEvent2014_8_3_scaffold_566_12
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11430..13235)
DNA (1806bp) protein (602aa)
lepA; elongation factor 4 (EC:3.6.5.n1)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRN3_CLOSA
NECEvent2014_8_3_scaffold_566_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13363..13689)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TLZ2_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54689.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_8_3_scaffold_566_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13754..14311)
DNA (558bp) protein (186aa)
Stage II sporulation protein P n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3V6_9CLOT
Stage II sporulation protein P {ECO:0000313|EMBL:EEH98837.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
stage II sporulation protein P
Displaying 14 items

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