ggKbase home page

NECEvent2014_8_3_scaffold_592

Alias: 178_003_scaffold_592

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_592_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01902.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799
NECEvent2014_8_3_scaffold_592_trna_1
unknown

Not on your lists

9..90
DNA (82bp)
transferRNA
NECEvent2014_8_3_scaffold_592_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

565..1740
DNA (1176bp) protein (392aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
metK; methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=2 Tax=Clostridium botulinum B RepID=METK_CLOBB
NECEvent2014_8_3_scaffold_592_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1781..2917)
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=457396 species=
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H499_9CLOT rbh
N-acetylglucosamine-6-phosphate deacetylase
NECEvent2014_8_3_scaffold_592_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3021..5243
DNA (2223bp) protein (741aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
Helicase, RecD/TraA family n=2 Tax=Clostridium butyricum RepID=M8JFP9_CLOBU
phoH-like family protein
NECEvent2014_8_3_scaffold_592_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5260..6261
DNA (1002bp) protein (334aa)
Superfamily II DNA/RNA helicase required for DNA uptake n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT2_CLOSA
superfamily II DNA/RNA helicase required for DNA uptake
Superfamily II DNA/RNA helicase required for DNA uptake {ECO:0000313|EMBL:AGX41550.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
NECEvent2014_8_3_scaffold_592_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6243..6884
DNA (642bp) protein (214aa)
ComF family protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XMQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU73164.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
phosphoribosyl transferase domain protein
NECEvent2014_8_3_scaffold_592_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7570..8112
DNA (543bp) protein (181aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q047_9CLOT
ribosome-associated factor Y
Ribosomal subunit interface protein {ECO:0000313|EMBL:ERK32120.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinal
NECEvent2014_8_3_scaffold_592_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8298..10823
DNA (2526bp) protein (842aa)
Protein translocase subunit SecA n=1 Tax=Clostridium colicanis 209318 RepID=N9WD75_9CLOT rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
secA; preprotein translocase, SecA subunit
NECEvent2014_8_3_scaffold_592_9
unknown

Not on your lists

10883..11068
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_592_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11007..11984
DNA (978bp) protein (326aa)
Putative Peptide chain release factor 2 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F208_9CLOT rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
prfB; peptide chain release factor 2
NECEvent2014_8_3_scaffold_592_11
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12011..12667
DNA (657bp) protein (219aa)
phosphorylated carbohydrates phosphatase (EC:3.1.3.-)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CGG7_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERI89604.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;
NECEvent2014_8_3_scaffold_592_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12660..13217
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H810_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH98529.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_3_scaffold_592_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13341..13766
DNA (426bp) protein (142aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M0M5_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHI99297.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Hypothetical protein
Displaying 14 items

View Taxonomy