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NECEvent2014_8_3_scaffold_694

Alias: 178_003_scaffold_694

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_694_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..726)
DNA (726bp) protein (242aa)
aryl-phospho-beta-glucosidase (EC:3.2.1.86)
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9E6_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU72699.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_3_scaffold_694_2
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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857..1543
DNA (687bp) protein (229aa)
GntR family transcriptional regulator n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2K9_CLOPA
GntR family transcriptional regulator {ECO:0000313|EMBL:ETD70665.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteuri
GntR family transcriptional regulator
NECEvent2014_8_3_scaffold_694_3
unknown

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comp(1695..1880)
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_694_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1975..2478)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TW65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57020.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
hypothetical protein
NECEvent2014_8_3_scaffold_694_5

Not on your lists

comp(2471..3604)
DNA (1134bp) protein (378aa)
Membrane protein n=1 Tax=uncultured organism RepID=M1P0K2_9ZZZZ
Membrane protein {ECO:0000313|EMBL:AGF92881.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
NECEvent2014_8_3_scaffold_694_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3789..5555)
DNA (1767bp) protein (589aa)
Xaa-Pro aminopeptidase 1 (EC:3.4.11.9)
Putative Xaa-Pro aminopeptidase 1 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENM7_9CLOT rbh
Putative Xaa-Pro aminopeptidase 1 {ECO:0000313|EMBL:CDG02782.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4
NECEvent2014_8_3_scaffold_694_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5688..6536
DNA (849bp) protein (283aa)
LD-carboxypeptidase family protein {ECO:0000313|EMBL:ACD24527.1}; Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:CDH91414.1}; EC=3.4.17.13 {ECO:0000313|EMBL:CDH91414.1};; TaxID=935198 species
LD-carboxypeptidase family protein n=2 Tax=Clostridium botulinum B RepID=B2TN89_CLOBB
LD-carboxypeptidase family protein
NECEvent2014_8_3_scaffold_694_8
unknown

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comp(6578..7741)
DNA (1164bp) protein (388aa)

This feature has no annotations

NECEvent2014_8_3_scaffold_694_9
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7761..8153)
DNA (393bp) protein (131aa)
Sigma-70 region 2 n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7F3_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:ESL03586.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
RNA polymerase sigma factor, sigma-70 family
NECEvent2014_8_3_scaffold_694_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8438..9727)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CB83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR26567.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
NECEvent2014_8_3_scaffold_694_11
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9720..10292)
DNA (573bp) protein (191aa)
RNA polymerase factor sigma-70 (EC:2.7.7.6)
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Bacillus RepID=C3AK16_BACMY
Uncharacterized protein {ECO:0000313|EMBL:KEZ88457.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_8_3_scaffold_694_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10577..11794)
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q605_9CLOT rbh
sensor histidine kinase
Displaying 12 items

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