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NECEvent2014_8_3_scaffold_1041

Alias: 178_003_scaffold_1041

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_1041_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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268..969
DNA (702bp) protein (234aa)
30S ribosomal protein S2 n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IJD4_CLOBU
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.
rpsB; 30S ribosomal protein S2
NECEvent2014_8_3_scaffold_1041_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1058..1969
DNA (912bp) protein (304aa)
Elongation factor Ts n=1 Tax=Clostridium colicanis 209318 RepID=N9WFZ1_9CLOT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridi
tsf; elongation factor Ts
NECEvent2014_8_3_scaffold_1041_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2040..2753
DNA (714bp) protein (238aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; uridylate kinase PyrH (EC:2.7.4.22)
Uridylate kinase n=2 Tax=Clostridium butyricum RepID=M8KCM3_CLOBU
NECEvent2014_8_3_scaffold_1041_4
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2764..3321
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TPL3_9CLOT
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1196322 species="Bacteria;
frr; ribosome-recycling factor Frr
NECEvent2014_8_3_scaffold_1041_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3391..4161
DNA (771bp) protein (257aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium colicanis 209318 RepID=N9XPZ8_9CLOT rbh
NECEvent2014_8_3_scaffold_1041_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4210..4971
DNA (762bp) protein (254aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
Phosphatidate cytidylyltransferase n=2 Tax=Clostridium botulinum B RepID=B2TJ45_CLOBB
cytidylyltransferase family protein
NECEvent2014_8_3_scaffold_1041_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5058..6023
DNA (966bp) protein (322aa)
Putative membrane protein n=3 Tax=Clostridium botulinum RepID=B2TJ46_CLOBB
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ACD24065.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Ekl
NECEvent2014_8_3_scaffold_1041_8
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6043..7203
DNA (1161bp) protein (387aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium beijerinckii RepID=UPI0003048411
NECEvent2014_8_3_scaffold_1041_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7215..7646
DNA (432bp) protein (144aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
rasP; RIP metalloprotease RasP (EC:3.4.24.-)
Putative membrane-associated Zn-dependent protease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TPK9_9CLOT
Displaying 9 items

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