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NECEvent2014_8_3_scaffold_260_1

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 3..689

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 228.0
  • Bit_score: 267
  • Evalue 1.40e-68
Shikimate dehydrogenase n=8 Tax=Clostridium difficile RepID=G6B8I3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 228.0
  • Bit_score: 267
  • Evalue 9.80e-69
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 228.0
  • Bit_score: 265
  • Evalue 1.80e-68

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 687
GATAAGGTGAAGAAGGTTGGAGAGAGTATAAAGATATTTGGAATAAGGGGTATGAATGTAACAATTCCTTATAAAAAAGAAATTATGGATCAGCTAGATTTTATATCGGATGAATCTAGAAAGATTGGGGCAGTAAATACTATAAGTTTGGAGAATGGAAAACTTTATGGTTATAATACAGATTATTATGGATTTGGCCTTATGCTAGATATTAGTAAAATTGAAGTTAAAGATAAAAGAGCAGTAGTACTAGGAACAGGTGGAGCTGCAAAAGCAGTTGTTACGTATCTTCAAGACAAAGGAGTAAAGGAACTATTTGTAGTAAGTAGAAATAAGATGAAGAATAATTGGAGTGGTGAAGTTAATCTAATAGATTATTCTGACTTACAGAGTTTAGAAGGTGACTTACTTATTAACACAACTCCAGTTGGTATGTATCCTAATGTAGGAAAATCTCCTGTGGGTGAAAATGTTATAAAAAGATTTGAAGCTATAGTTGATTTAATATATAACCCAAGAGAGACAGAATTGTTGAGGCTAGCTAAATTAAATGGTAAAAAAAGTTGTGATGGATTATATATGTTAGTAGGTCAAGCAGTGAAGGCACAAGAAATATGGCAAGACATGAATATAGATAATAAGGTAACAAATATTATTTATGAAGAACTTAATGGTGAATTCAACTAG
PROTEIN sequence
Length: 229
DKVKKVGESIKIFGIRGMNVTIPYKKEIMDQLDFISDESRKIGAVNTISLENGKLYGYNTDYYGFGLMLDISKIEVKDKRAVVLGTGGAAKAVVTYLQDKGVKELFVVSRNKMKNNWSGEVNLIDYSDLQSLEGDLLINTTPVGMYPNVGKSPVGENVIKRFEAIVDLIYNPRETELLRLAKLNGKKSCDGLYMLVGQAVKAQEIWQDMNIDNKVTNIIYEELNGEFN*