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NECEvent2014_8_3_scaffold_260

Alias: 178_003_scaffold_260

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_260_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..689
DNA (687bp) protein (229aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=8 Tax=Clostridium difficile RepID=G6B8I3_CLODI
shikimate dehydrogenase
NECEvent2014_8_3_scaffold_260_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

705..1220
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=999411 species="Bacteria; Firmicutes; Clostridia;
Shikimate kinase n=1 Tax=Clostridium colicanis 209318 RepID=N9XSI9_9CLOT
shikimate kinase family protein
NECEvent2014_8_3_scaffold_260_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1225..1653
DNA (429bp) protein (143aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|H
3-dehydroquinate dehydratase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G3L9_CLOPA
3-dehydroquinate dehydratase
NECEvent2014_8_3_scaffold_260_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1754..2791
DNA (1038bp) protein (346aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase AroF (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF {ECO:0000313|EMBL:AGF59048.1}; EC=2.5.1.54 {ECO:0000313|EMBL:AGF59048.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clost
Phospho-2-dehydro-3-deoxyheptonate aldolase AroF n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MSB8_9CLOT
NECEvent2014_8_3_scaffold_260_5
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2812..3645
DNA (834bp) protein (278aa)
tyrA; prephenate dehydrogenase TyrA (EC:1.3.1.12)
Prephenate dehydrogenase TyrA {ECO:0000313|EMBL:AGF59047.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AGF59047.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Prephenate dehydrogenase TyrA n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N6L6_9CLOT
NECEvent2014_8_3_scaffold_260_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3751..4284)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ02634.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
CYTH domain protein
NECEvent2014_8_3_scaffold_260_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4453..5160
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=457396 species="Bacteria
Purine nucleoside phosphorylase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H757_9CLOT rbh
deoD; purine nucleoside phosphorylase
NECEvent2014_8_3_scaffold_260_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5196..5969
DNA (774bp) protein (258aa)
srtB; sortase, SrtB family (EC:3.4.22.71)
Sortase, SrtB family {ECO:0000313|EMBL:AIY84337.1}; EC=3.4.22.71 {ECO:0000313|EMBL:AIY84337.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q0A1_9CLOT
NECEvent2014_8_3_scaffold_260_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6143..7735
DNA (1593bp) protein (531aa)
Na/Pi cotransporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002885DFD rbh
Na/Pi-cotransporter family protein/PhoU family protein
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KIL09207.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.
NECEvent2014_8_3_scaffold_260_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7810..8850
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CEW4_9CLOT rbh
37-kD nucleoid-associated bacterial family protein
37-kD nucleoid-associated bacterial family protein {ECO:0000313|EMBL:AIY84231.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_8_3_scaffold_260_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8910..9950)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H530_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH99286.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
apbE family protein
NECEvent2014_8_3_scaffold_260_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10055..10501)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99285.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_3_scaffold_260_13
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10858..12729
DNA (1872bp) protein (624aa)
NADH dehydrogenase n=1 Tax=Clostridium intestinale URNW RepID=U2NSJ4_9CLOT rbh
NADH dehydrogenase {ECO:0000313|EMBL:ERK32143.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
pyridine nucleotide-disulfide oxidoreductase family protein
NECEvent2014_8_3_scaffold_260_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12858..13256
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99283.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_3_scaffold_260_15
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13269..13787
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR20269.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_3_scaffold_260_16
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13799..14764
DNA (966bp) protein (322aa)
Trans-hexaprenyltranstransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT72_9CLOT rbh
Trans-hexaprenyltranstransferase {ECO:0000313|EMBL:EOR20268.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme
polyprenyl synthetase family protein
NECEvent2014_8_3_scaffold_260_17
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14773..15660)
DNA (888bp) protein (296aa)
LysR family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BTC9_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:EOR20267.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
putative Transcriptional regulator
NECEvent2014_8_3_scaffold_260_18
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15789..16928
DNA (1140bp) protein (380aa)
Extracellular solute-binding protein family 1 n=1 Tax=Clostridium sp. DL-VIII RepID=G7LZ51_9CLOT
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EHI97403.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium s
ABC-type sugar transport system periplasmic component-like protein
NECEvent2014_8_3_scaffold_260_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16917..18044)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S6_9CLOT rbh
Glycosyl transferase {ECO:0000313|EMBL:KJU73110.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycosyl transferases group 1 family protein
NECEvent2014_8_3_scaffold_260_20
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18166..19161
DNA (996bp) protein (332aa)
Spore coat protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FYZ9_CLOPA
spore coat protein, CotS family
Spore coat protein {ECO:0000313|EMBL:ETD69081.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
NECEvent2014_8_3_scaffold_260_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19203..19907
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TJK9_CLOBB
hypothetical protein
Spore coat protein {ECO:0000313|EMBL:CDH89399.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD23102.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
NECEvent2014_8_3_scaffold_260_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19897..20979
DNA (1083bp) protein (361aa)
Spore coat protein, CotS family n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UZG5_CLOBA
CotS family spore coat protein
Spore coat protein {ECO:0000313|EMBL:KIL08727.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_3_scaffold_260_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21034..22164)
DNA (1131bp) protein (377aa)
Group 1 glycosyl transferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BZ61_9CLOT rbh
Glycosyl transferase {ECO:0000313|EMBL:KJU73114.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycosyl transferases group 1 family protein
NECEvent2014_8_3_scaffold_260_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22269..23240
DNA (972bp) protein (324aa)
CotS family spore coat protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8S3_9CLOT
CotS family spore coat protein {ECO:0000313|EMBL:EEH99273.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore coat protein CotS
NECEvent2014_8_3_scaffold_260_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23416..24369
DNA (954bp) protein (318aa)
Sporulation peptidase YabG n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4D2_9CLOT rbh
Sporulation peptidase YabG {ECO:0000313|EMBL:EEH99272.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sporulation peptidase YabG
NECEvent2014_8_3_scaffold_260_26
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24611..24805
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TU41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI97421.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
Displaying 26 items

View Taxonomy