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NECEvent2014_8_3_scaffold_501_8

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(7424..7642)

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 72.0
  • Bit_score: 113
  • Evalue 3.60e-23
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 72.0
  • Bit_score: 113
  • Evalue 1.80e-22
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridium intestinale URNW RepID=U2NPG4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 72.0
  • Bit_score: 110
  • Evalue 8.30e-22

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 219
ATGAGTAATTCAATGATTAATCCATCAGTAGTAGATTTATTAAAAAAGGTAGAAGATAGATATTCACTAGTAATAGTAACATCAAAAAGAGCTAGACAGTTAATAGACGGTTCTAAACAATTAGTAGATGTAGATTCTAAAAAGGCTTTAACTATTGCAATAAATGAAGTAAATGATGGCGCAGTTGGATATGAGAGAGTAAAGGAATCAACTAAGTAA
PROTEIN sequence
Length: 73
MSNSMINPSVVDLLKKVEDRYSLVIVTSKRARQLIDGSKQLVDVDSKKALTIAINEVNDGAVGYERVKESTK*