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NECEvent2014_8_3_scaffold_514_17

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 13737..14231

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor SigV n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAY4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 159.0
  • Bit_score: 173
  • Evalue 2.40e-40
Putative RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EKY25116.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celat similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 159.0
  • Bit_score: 173
  • Evalue 3.30e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 155.0
  • Bit_score: 139
  • Evalue 1.10e-30

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Taxonomy

Clostridium celatum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
ATGTCCATATTTAGTAGTAGGAAAAGAGAAAAGATATTAGAAAACTACTTAGAGTCGAATAGCGATAAACTATATAGGCTTGCTTTTGTATATGTTAAAAATAAAAATGAATCCTTAGATATTCTTCAAGACTCTATAGTTAAAGCGTACAAAAATATTAATAAGATTAAAGATATGAAAGCATTAGAAAAGTGGATTAATAAAATATTAATTAATACAGCTTTGGACTATTTAAGGAAAAGGTCAAGGATTGTCTATTGTGATGATATATTTAAGAATATTGAATTAATAGAAGATAATAACAGTGAATTAATAGAATCTGTGGATAACTTACCTGAAGATTTAAAAACTGTGATTATTTTAAAATATTTTCATGGCTACACCATAAATGAAGTAAGTGAGATTTTAGAGATATCTGTTCCAACTGTAAAGAATAGACTTCATAAAGCACTTAATTTTCTTAGAAAAGAATTTAAGGAGGGTAGTTATGAGTAA
PROTEIN sequence
Length: 165
MSIFSSRKREKILENYLESNSDKLYRLAFVYVKNKNESLDILQDSIVKAYKNINKIKDMKALEKWINKILINTALDYLRKRSRIVYCDDIFKNIELIEDNNSELIESVDNLPEDLKTVIILKYFHGYTINEVSEILEISVPTVKNRLHKALNFLRKEFKEGSYE*