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NECEvent2014_8_3_scaffold_514

Alias: 178_003_scaffold_514

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_3_scaffold_514_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..652
DNA (651bp) protein (217aa)
Sensory transduction protein kinase n=1 Tax=Clostridium botulinum RepID=R4NP23_CLOBO
His Kinase A domain protein {ECO:0000313|EMBL:AIY79037.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
sensory transduction protein kinase
NECEvent2014_8_3_scaffold_514_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(715..1209)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U710_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57756.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
hypothetical protein
NECEvent2014_8_3_scaffold_514_3
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1371..2117
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
7-alpha-hydroxysteroid dehydrogenase n=1 Tax=Methanoculleus sp. CAG:1088 RepID=R7Q0J0_9EURY
7-alpha-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:CDF30342.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environment
NECEvent2014_8_3_scaffold_514_4
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2176..3072
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI00036264D5
transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:AIF54124.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UF
NECEvent2014_8_3_scaffold_514_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3023..4354
DNA (1332bp) protein (444aa)
Putative MATE efflux family protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EMI2_9CLOT rbh
Putative MATE efflux family protein {ECO:0000313|EMBL:CDG02412.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei J
hypothetical protein
NECEvent2014_8_3_scaffold_514_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4441..4662
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LW65_CLOB8
Uncharacterized protein {ECO:0000313|EMBL:KJU70462.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_3_scaffold_514_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4785..5285
DNA (501bp) protein (167aa)
Putative Acetyltransferase, GNAT family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F1F9_9CLOT
Putative Acetyltransferase, GNAT family {ECO:0000313|EMBL:CDG02411.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvo
GNAT family acetyltransferase
NECEvent2014_8_3_scaffold_514_8
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5584..6546
DNA (963bp) protein (321aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ABC-type metal ion transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U2W9_9CLOT
ABC transporter
NECEvent2014_8_3_scaffold_514_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6548..7186
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99115.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metI; D-methionine transport system permease protein MetI
NECEvent2014_8_3_scaffold_514_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7206..8024
DNA (819bp) protein (273aa)
methionine ABC transporter substrate-binding protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002E37724
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
YaeC family lipoprotein
NECEvent2014_8_3_scaffold_514_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8179..8883
DNA (705bp) protein (235aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H448_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99111.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_8_3_scaffold_514_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8939..9640)
DNA (702bp) protein (234aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAU5_9CLOT rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EKQ55919.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
ABC transporter related protein
NECEvent2014_8_3_scaffold_514_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9642..10400)
DNA (759bp) protein (253aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:EHI96874.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EHI96874.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
Sulfate-transporting ATPase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAW6_9CLOT rbh
ABC transporter
NECEvent2014_8_3_scaffold_514_14
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10404..11375)
DNA (972bp) protein (324aa)
Inner-membrane translocator n=2 Tax=Clostridium cellulovorans RepID=D9SUP0_CLOC7 rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL50945.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (stra
NECEvent2014_8_3_scaffold_514_15
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11385..12260)
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUP1_CLOC7 rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ADL50946.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (stra
NECEvent2014_8_3_scaffold_514_16
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12290..13444)
DNA (1155bp) protein (385aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1M1I7_9CLOT rbh
amino acid/amide ABC transporter substrate-binding protein, HAAT family
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:AGF59480.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
NECEvent2014_8_3_scaffold_514_17
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13737..14231
DNA (495bp) protein (165aa)
Putative RNA polymerase sigma factor SigV n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QAY4_9CLOT
Putative RNA polymerase sigma factor SigV {ECO:0000313|EMBL:EKY25116.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celat
ECF subfamily RNA polymerase sigma-24 subunit
NECEvent2014_8_3_scaffold_514_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14224..15546
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY25117.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
Displaying 18 items

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