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NECEvent2014_8_3_scaffold_583_13

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 13709..13930

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium RepID=A6LSG7_CLOB8 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 74.0
  • Bit_score: 128
  • Evalue 3.90e-27
sporulation sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 74.0
  • Bit_score: 126
  • Evalue 3.20e-27
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 74.0
  • Bit_score: 126
  • Evalue 1.60e-26

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Taxonomy

Clostridium beijerinckii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 222
GTGTTTATATTATCAAATTTTTTAAATCTTATAACTAACTCCCTATTCTTAACTGGGTATATTACTGGAAATAACACATTTCCTTTACCACTTGATGAAAAAGATGAGGAATTATACTTAAACAAACTAAAAGAGGGAGATAAAAAAGCAAAAAGTATCTTAATTGAAAGGAATCTCCGACTAGTTGCTCATATTGTAAAGAAGTATTCTTTTCCTAATAAA
PROTEIN sequence
Length: 74
VFILSNFLNLITNSLFLTGYITGNNTFPLPLDEKDEELYLNKLKEGDKKAKSILIERNLRLVAHIVKKYSFPNK