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NECEvent2014_8_3_Enterobacteriales_53_8_partial

NECEvent2014_8_3_Enterobacteriales_53_8
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_3_UNK

Properties

Avg. coverage: 7.93 Longest contig: 10.66 Kbp Bin length: 3.03 Mbp GC content: 53.33 %
Contigs count: 1510 Features count: 4036 rRNAs count: 0 tRNAs count: 20

Genome completeness

partial RP 3 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1

Description

ESOM area

Displaying items 51-100 of 1510 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_3_scaffold_4867 178_003_scaffold_4867
Species: Enterobacter cloacae (50%)
2 1024 bp 53.03 5.86 100.20
NECEvent2014_8_3_scaffold_4851 178_003_scaffold_4851
Species: Enterobacter sp. R4-368 (100%)
2 1030 bp 54.95 6.70 100.19
NECEvent2014_8_3_scaffold_3547 178_003_scaffold_3547
Species: Enterobacter cloacae (50%)
2 1611 bp 54.07 6.89 100.19
NECEvent2014_8_3_scaffold_4612 178_003_scaffold_4612
Species: Kosakonia sacchari (50%)
2 1105 bp 56.38 8.28 100.18
NECEvent2014_8_3_scaffold_4589 178_003_scaffold_4589
Species: Enterobacter sp. R4-368 (50%)
2 1114 bp 60.68 10.50 100.18
NECEvent2014_8_3_scaffold_4521 178_003_scaffold_4521
Species: Kosakonia radicincitans (50%)
2 1144 bp 53.76 7.60 100.18
NECEvent2014_8_3_scaffold_3353 178_003_scaffold_3353
Species: Enterobacter sp. YD4 (50%)
2 1743 bp 55.71 7.06 100.17
NECEvent2014_8_3_scaffold_4476 178_003_scaffold_4476
Species: Enterobacter cancerogenus (50%)
2 1162 bp 53.79 6.97 100.17
NECEvent2014_8_3_scaffold_4369 178_003_scaffold_4369
Species: Escherichia vulneris (50%)
2 1210 bp 54.71 7.93 100.16
NECEvent2014_8_3_scaffold_4342 178_003_scaffold_4342
Species: Citrobacter koseri (50%)
2 1222 bp 60.88 4.66 100.16
NECEvent2014_8_3_scaffold_2600 178_003_scaffold_2600
Species: Kosakonia radicincitans (50%)
2 2444 bp 57.82 6.14 100.16
NECEvent2014_8_3_scaffold_4289 178_003_scaffold_4289
Species: Enterobacter asburiae (50%)
2 1243 bp 54.55 6.28 100.16
NECEvent2014_8_3_scaffold_3072 178_003_scaffold_3072
Species: Enterobacter sp. 35699 (50%)
2 1956 bp 58.54 4.91 100.15
NECEvent2014_8_3_scaffold_4151 178_003_scaffold_4151
Species: Enterobacter sp. YD4 (50%)
2 1306 bp 57.20 8.15 100.15
NECEvent2014_8_3_scaffold_3049 178_003_scaffold_3049
Species: Enterobacter sp. R4-368 (50%)
4 1974 bp 54.36 8.51 100.15
NECEvent2014_8_3_scaffold_2943 178_003_scaffold_2943
Order: Enterobacteriales (100%)
3 2067 bp 55.30 8.93 100.15
NECEvent2014_8_3_scaffold_2873 178_003_scaffold_2873
Species: Enterobacter sp. R4-368 (50%)
2 2139 bp 56.57 5.75 100.14
NECEvent2014_8_3_scaffold_2200 178_003_scaffold_2200
Species: Klebsiella oxytoca (50%)
2 3029 bp 60.85 6.39 100.13
NECEvent2014_8_3_scaffold_2735 178_003_scaffold_2735
Genus: Enterobacter (66.67%)
3 2295 bp 60.52 9.35 100.13
NECEvent2014_8_3_scaffold_3671 178_003_scaffold_3671
Species: Kosakonia sacchari (50%)
2 1537 bp 55.82 8.59 100.13
NECEvent2014_8_3_scaffold_2684 178_003_scaffold_2684
Species: Klebsiella oxytoca (100%)
2 2349 bp 58.28 8.56 100.13
NECEvent2014_8_3_scaffold_2638 178_003_scaffold_2638
Species: Enterobacter sp. R4-368 (100%)
2 2394 bp 58.27 6.77 100.13
NECEvent2014_8_3_scaffold_4600 178_003_scaffold_4600
Species: Enterobacter sp. YD4 (50%)
2 1109 bp 62.40 4.33 100.09
NECEvent2014_8_3_scaffold_4523 178_003_scaffold_4523
Species: Enterobacter sp. MGH 14 (50%)
2 1142 bp 55.95 8.67 100.09
NECEvent2014_8_3_scaffold_4339 178_003_scaffold_4339
Species: Kosakonia sacchari (50%)
2 1223 bp 58.30 8.59 100.08
NECEvent2014_8_3_scaffold_4319 178_003_scaffold_4319
Species: Enterobacter sp. 638 (50%)
2 1229 bp 58.18 7.57 100.08
NECEvent2014_8_3_scaffold_4302 178_003_scaffold_4302
Species: Enterobacter sp. 35699 (50%)
2 1235 bp 59.92 5.34 100.08
NECEvent2014_8_3_scaffold_3995 178_003_scaffold_3995
Species: Citrobacter koseri (50%)
2 1373 bp 58.19 7.43 100.07
NECEvent2014_8_3_scaffold_3839 178_003_scaffold_3839
Species: Enterobacter aerogenes (50%)
2 1445 bp 57.16 9.86 100.07
NECEvent2014_8_3_scaffold_2257 178_003_scaffold_2257
Order: Enterobacteriales (100%)
4 2926 bp 58.71 7.64 100.07
NECEvent2014_8_3_scaffold_3692 178_003_scaffold_3692
Species: Cronobacter sakazakii (50%)
2 1523 bp 55.15 6.89 100.07
NECEvent2014_8_3_scaffold_3456 178_003_scaffold_3456
Species: Kosakonia sacchari (66.67%)
3 1670 bp 57.84 7.01 100.06
NECEvent2014_8_3_scaffold_3319 178_003_scaffold_3319
Order: Enterobacteriales (100%)
3 1763 bp 59.33 8.85 100.06
NECEvent2014_8_3_scaffold_2940 178_003_scaffold_2940
Species: Enterobacter sp. 42324 (50%)
2 2069 bp 60.71 6.38 100.05
NECEvent2014_8_3_scaffold_4497 178_003_scaffold_4497
Species: Enterobacter cloacae (100%)
1 1152 bp 57.99 26.04 100.00
NECEvent2014_8_3_scaffold_4760 178_003_scaffold_4760
Species: Trabulsiella guamensis (100%)
1 1056 bp 56.53 5.68 100.00
NECEvent2014_8_3_scaffold_4267 178_003_scaffold_4267
Species: Lelliottia amnigena (100%)
1 1254 bp 55.50 8.37 100.00
NECEvent2014_8_3_scaffold_4275 178_003_scaffold_4275
Species: Salmonella enterica (100%)
1 1251 bp 60.27 7.79 100.00
NECEvent2014_8_3_scaffold_4547 178_003_scaffold_4547
Species: Enterobacter lignolyticus (100%)
1 1134 bp 52.91 11.38 100.00
NECEvent2014_8_3_scaffold_4054 178_003_scaffold_4054
Species: Kosakonia radicincitans (100%)
2 1347 bp 61.32 8.69 100.00
NECEvent2014_8_3_scaffold_4862 178_003_scaffold_4862
Species: Kosakonia radicincitans (100%)
1 1026 bp 55.75 8.63 100.00
NECEvent2014_8_3_scaffold_4870 178_003_scaffold_4870
Species: Enterobacter asburiae (50%)
2 1023 bp 57.38 4.99 100.00
NECEvent2014_8_3_scaffold_4617 178_003_scaffold_4617
Species: Enterobacter sp. R4-368 (50%)
2 1104 bp 53.35 3.53 100.00
NECEvent2014_8_3_scaffold_4636 178_003_scaffold_4636
Species: Kosakonia radicincitans (50%)
2 1095 bp 57.44 4.38 100.00
NECEvent2014_8_3_scaffold_2341 178_003_scaffold_2341
Species: Klebsiella pneumoniae (50%)
2 2802 bp 53.78 6.96 100.00
NECEvent2014_8_3_scaffold_4907 178_003_scaffold_4907
Species: Citrobacter werkmanii (100%)
1 1008 bp 54.56 12.05 100.00
NECEvent2014_8_3_scaffold_2877 178_003_scaffold_2877
Species: Kosakonia radicincitans (100%)
1 2136 bp 55.01 6.95 100.00
NECEvent2014_8_3_scaffold_4166 178_003_scaffold_4166
Species: Kosakonia sacchari (100%)
1 1299 bp 55.43 6.58 100.00
NECEvent2014_8_3_scaffold_4428 178_003_scaffold_4428
Species: Kosakonia sacchari (100%)
1 1182 bp 57.70 9.77 100.00
NECEvent2014_8_3_scaffold_3182 178_003_scaffold_3182
Species: Kosakonia radicincitans (50%)
2 1866 bp 56.00 5.79 100.00
Displaying items 51-100 of 1510 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.