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NECEvent2014_8_3_Enterobacteriales_53_8_partial

NECEvent2014_8_3_Enterobacteriales_53_8
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_3_UNK

Properties

Avg. coverage: 7.93 Longest contig: 10.66 Kbp Bin length: 3.03 Mbp GC content: 53.33 %
Contigs count: 1510 Features count: 4036 rRNAs count: 0 tRNAs count: 20

Genome completeness

partial RP 3 / 55 MC: 1 BSCG 3 / 51 ASCG 6 / 38 MC: 1

Description

ESOM area

Displaying items 1451-1500 of 1510 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_3_scaffold_765 178_003_scaffold_765
Order: Enterobacteriales (86.67%)
15 10655 bp 52.26 10.70 85.73
NECEvent2014_8_3_scaffold_3784 178_003_scaffold_3784
Species: Shewanella sp. MR-7 (100%)
1 1473 bp 46.10 10.79 67.01
NECEvent2014_8_3_scaffold_2527 178_003_scaffold_2527
Order: Enterobacteriales (100%)
5 2530 bp 48.62 10.79 75.89
NECEvent2014_8_3_scaffold_3970 178_003_scaffold_3970
Species: Enterobacter cloacae (50%)
2 1384 bp 52.46 10.84 89.31
NECEvent2014_8_3_scaffold_2284 178_003_scaffold_2284
Species: Kosakonia sacchari (50%)
2 2890 bp 52.46 10.85 87.51
NECEvent2014_8_3_scaffold_4357 178_003_scaffold_4357
Species: Enterobacter sp. MGH 24 (50%)
2 1215 bp 56.13 10.86 100.25
NECEvent2014_8_3_scaffold_3616 178_003_scaffold_3616
Order: Enterobacteriales (100%)
3 1571 bp 46.98 10.88 76.00
NECEvent2014_8_3_scaffold_3153 178_003_scaffold_3153
Order: Enterobacteriales (100%)
3 1885 bp 52.89 10.90 75.28
NECEvent2014_8_3_scaffold_1886 178_003_scaffold_1886
Genus: Enterobacter (50%)
6 3765 bp 53.81 10.92 82.63
NECEvent2014_8_3_scaffold_2554 178_003_scaffold_2554
Genus: Enterobacter (80%)
5 2497 bp 56.07 10.93 88.67
NECEvent2014_8_3_scaffold_2810 178_003_scaffold_2810
Order: Enterobacteriales (100%)
4 2210 bp 49.91 10.93 87.15
NECEvent2014_8_3_scaffold_3197 178_003_scaffold_3197
Species: Enterobacter asburiae (50%)
4 1850 bp 50.86 10.95 101.03
NECEvent2014_8_3_scaffold_4281 178_003_scaffold_4281
Species: Klebsiella oxytoca (100%)
1 1246 bp 54.82 10.96 99.92
NECEvent2014_8_3_scaffold_3516 178_003_scaffold_3516
Order: Enterobacteriales (100%)
3 1629 bp 45.37 10.96 83.06
NECEvent2014_8_3_scaffold_2066 178_003_scaffold_2066
Order: Enterobacteriales (100%)
4 3310 bp 54.14 10.97 92.08
NECEvent2014_8_3_scaffold_4359 178_003_scaffold_4359
Order: Enterobacteriales (100%)
3 1214 bp 54.20 11.00 99.59
NECEvent2014_8_3_scaffold_1774 178_003_scaffold_1774
Species: Enterobacter sp. YD4 (50%)
4 4039 bp 53.23 11.03 80.44
NECEvent2014_8_3_scaffold_3428 178_003_scaffold_3428
Species: Citrobacter koseri (50%)
2 1685 bp 53.29 11.04 63.20
NECEvent2014_8_3_scaffold_3173 178_003_scaffold_3173
Species: Kosakonia sacchari (66.67%)
3 1873 bp 53.66 11.05 85.85
NECEvent2014_8_3_scaffold_2120 178_003_scaffold_2120
Species: Escherichia vulneris (50%)
4 3199 bp 50.30 11.11 88.72
NECEvent2014_8_3_scaffold_2639 178_003_scaffold_2639
Order: Enterobacteriales (66.67%)
3 2394 bp 41.27 11.15 58.15
NECEvent2014_8_3_scaffold_3941 178_003_scaffold_3941
Species: Kosakonia radicincitans (50%)
2 1397 bp 48.89 11.17 87.62
NECEvent2014_8_3_scaffold_4278 178_003_scaffold_4278
Species: Escherichia coli (50%)
2 1249 bp 53.56 11.29 98.48
NECEvent2014_8_3_scaffold_4547 178_003_scaffold_4547
Species: Enterobacter lignolyticus (100%)
1 1134 bp 52.91 11.38 100.00
NECEvent2014_8_3_scaffold_4627 178_003_scaffold_4627
Species: Escherichia coli (50%)
2 1099 bp 53.14 11.46 99.91
NECEvent2014_8_3_scaffold_3928 178_003_scaffold_3928
Species: Salmonella enterica (50%)
2 1403 bp 52.10 11.55 89.59
NECEvent2014_8_3_scaffold_2410 178_003_scaffold_2410
Genus: Enterobacter (50%)
4 2686 bp 52.16 11.56 83.88
NECEvent2014_8_3_scaffold_4461 178_003_scaffold_4461 3 1167 bp 48.59 11.57 83.55
NECEvent2014_8_3_scaffold_3792 178_003_scaffold_3792
Order: Enterobacteriales (100%)
3 1471 bp 51.19 11.62 83.82
NECEvent2014_8_3_scaffold_4669 178_003_scaffold_4669
Species: Klebsiella pneumoniae (100%)
1 1083 bp 55.77 11.63 99.72
NECEvent2014_8_3_scaffold_1226 178_003_scaffold_1226
Genus: Enterobacter (57.14%)
7 6362 bp 55.12 11.72 93.37
NECEvent2014_8_3_scaffold_2517 178_003_scaffold_2517
Species: Citrobacter sp. MGH 55 (50%)
2 2544 bp 49.65 11.85 68.16
NECEvent2014_8_3_scaffold_4279 178_003_scaffold_4279
Species: Kosakonia sacchari (50%)
2 1248 bp 52.64 11.90 87.26
NECEvent2014_8_3_scaffold_1485 178_003_scaffold_1485
Order: Enterobacteriales (100%)
6 5033 bp 54.26 11.92 95.13
NECEvent2014_8_3_scaffold_4582 178_003_scaffold_4582
Species: Citrobacter farmeri (100%)
1 1120 bp 44.55 11.92 83.30
NECEvent2014_8_3_scaffold_4907 178_003_scaffold_4907
Species: Citrobacter werkmanii (100%)
1 1008 bp 54.56 12.05 100.00
NECEvent2014_8_3_scaffold_4853 178_003_scaffold_4853
Species: Trabulsiella guamensis (50%)
2 1030 bp 43.30 12.23 78.93
NECEvent2014_8_3_scaffold_2396 178_003_scaffold_2396
Order: Enterobacteriales (100%)
3 2709 bp 49.06 12.29 92.14
NECEvent2014_8_3_scaffold_2955 178_003_scaffold_2955
Order: Enterobacteriales (100%)
3 2061 bp 54.25 12.52 96.65
NECEvent2014_8_3_scaffold_4341 178_003_scaffold_4341
Species: Kosakonia radicincitans (100%)
1 1222 bp 53.68 12.52 89.12
NECEvent2014_8_3_scaffold_3593 178_003_scaffold_3593
Species: Escherichia coli (50%)
2 1587 bp 53.56 12.57 83.93
NECEvent2014_8_3_scaffold_4114 178_003_scaffold_4114
Species: Enterobacter sp. 638 (50%)
4 1321 bp 52.61 12.72 99.24
NECEvent2014_8_3_scaffold_2424 178_003_scaffold_2424
Order: Enterobacteriales (100%)
3 2663 bp 54.94 12.73 93.95
NECEvent2014_8_3_scaffold_2242 178_003_scaffold_2242
Order: Enterobacteriales (75%)
4 2954 bp 56.06 12.85 93.33
NECEvent2014_8_3_scaffold_3566 178_003_scaffold_3566
Species: Enterobacter asburiae (100%)
1 1603 bp 55.46 13.01 99.94
NECEvent2014_8_3_scaffold_3545 178_003_scaffold_3545
Species: Citrobacter koseri (50%)
2 1613 bp 50.71 13.11 93.18
NECEvent2014_8_3_scaffold_3315 178_003_scaffold_3315
Species: Klebsiella oxytoca (50%)
2 1765 bp 54.11 13.68 94.84
NECEvent2014_8_3_scaffold_3909 178_003_scaffold_3909
Species: Enterobacter sp. YD4 (50%)
2 1414 bp 57.57 13.90 78.93
NECEvent2014_8_3_scaffold_3188 178_003_scaffold_3188
Species: Dickeya dadantii (50%)
2 1861 bp 42.56 13.94 40.78
NECEvent2014_8_3_scaffold_2847 178_003_scaffold_2847
Species: Salmonella enterica (66.67%)
3 2165 bp 47.25 15.31 56.81
Displaying items 1451-1500 of 1510 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.