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This organism can only be binned in the context of its binning project SCNPILOT_SOLID_1. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

NECEvent2014_8_3_Enterobacteriales_53_8_partial

NECEvent2014_8_3_Enterobacteriales_53_8
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

ESOM area

Displaying items 201-250 of 1510 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_3_scaffold_2527 178_003_scaffold_2527
Order: Enterobacteriales (100%)
5 2530 bp 48.62 10.79 75.89
NECEvent2014_8_3_scaffold_3115 178_003_scaffold_3115
Order: Enterobacteriales (66.67%)
3 1919 bp 55.50 6.57 75.98
NECEvent2014_8_3_scaffold_3616 178_003_scaffold_3616
Order: Enterobacteriales (100%)
3 1571 bp 46.98 10.88 76.00
NECEvent2014_8_3_scaffold_3178 178_003_scaffold_3178
Species: Kosakonia sacchari (50%)
2 1869 bp 47.41 5.78 76.08
NECEvent2014_8_3_scaffold_2055 178_003_scaffold_2055
Order: Enterobacteriales (83.33%)
6 3329 bp 52.87 6.94 76.15
NECEvent2014_8_3_scaffold_4243 178_003_scaffold_4243
Species: Enterobacter sp. 638 (100%)
1 1264 bp 51.27 7.36 76.19
NECEvent2014_8_3_scaffold_2118 178_003_scaffold_2118
Order: Enterobacteriales (66.67%)
3 3201 bp 47.42 5.25 76.19
NECEvent2014_8_3_scaffold_4753 178_003_scaffold_4753
Species: Escherichia coli (50%)
2 1059 bp 34.28 8.22 76.20
NECEvent2014_8_3_scaffold_3698 178_003_scaffold_3698
Order: Enterobacteriales (66.67%)
3 1521 bp 54.04 9.17 76.27
NECEvent2014_8_3_scaffold_2330 178_003_scaffold_2330
Order: Enterobacteriales (100%)
3 2814 bp 49.08 5.86 76.44
NECEvent2014_8_3_scaffold_4536 178_003_scaffold_4536
Species: Enterobacter asburiae (50%)
2 1138 bp 52.90 6.99 76.45
NECEvent2014_8_3_scaffold_4795 178_003_scaffold_4795
Species: Leclercia adecarboxylata (66.67%)
3 1046 bp 53.25 9.03 76.58
NECEvent2014_8_3_scaffold_4802 178_003_scaffold_4802
Species: Kosakonia sacchari (100%)
1 1044 bp 50.19 6.90 76.72
NECEvent2014_8_3_scaffold_2459 178_003_scaffold_2459
Species: Enterobacter sp. YD4 (66.67%)
3 2608 bp 54.75 10.64 76.73
NECEvent2014_8_3_scaffold_4236 178_003_scaffold_4236
Genus: Enterobacter (100%)
3 1266 bp 45.02 9.24 76.78
NECEvent2014_8_3_scaffold_4250 178_003_scaffold_4250
Species: Enterobacter lignolyticus (100%)
1 1261 bp 51.23 7.97 76.84
NECEvent2014_8_3_scaffold_2874 178_003_scaffold_2874
Species: Enterobacter sp. YD4 (50%)
2 2138 bp 53.84 8.98 76.89
NECEvent2014_8_3_scaffold_4258 178_003_scaffold_4258
Species: Kluyvera ascorbata (100%)
1 1256 bp 49.92 6.81 76.91
NECEvent2014_8_3_scaffold_3292 178_003_scaffold_3292
Species: Kluyvera ascorbata (50%)
2 1781 bp 51.66 7.92 76.98
NECEvent2014_8_3_scaffold_4828 178_003_scaffold_4828
Species: Kosakonia radicincitans (100%)
1 1036 bp 53.96 6.37 77.03
NECEvent2014_8_3_scaffold_3564 178_003_scaffold_3564
Genus: Pectobacterium (66.67%)
3 1604 bp 51.31 7.48 77.06
NECEvent2014_8_3_scaffold_4564 178_003_scaffold_4564
Species: Erwinia typographi (50%)
2 1129 bp 49.69 4.52 77.06
NECEvent2014_8_3_scaffold_4294 178_003_scaffold_4294
Species: Enterobacter lignolyticus (50%)
2 1240 bp 53.15 7.98 77.18
NECEvent2014_8_3_scaffold_2747 178_003_scaffold_2747
Order: Enterobacteriales (80%)
5 2281 bp 47.04 6.84 77.20
NECEvent2014_8_3_scaffold_4402 178_003_scaffold_4402
Species: Kluyvera ascorbata (50%)
2 1196 bp 57.02 4.14 77.26
NECEvent2014_8_3_scaffold_4097 178_003_scaffold_4097
Species: Enterobacter lignolyticus (50%)
2 1331 bp 49.21 5.18 77.31
NECEvent2014_8_3_scaffold_2189 178_003_scaffold_2189
Order: Enterobacteriales (100%)
6 3052 bp 50.98 7.62 77.36
NECEvent2014_8_3_scaffold_3441 178_003_scaffold_3441
Species: Enterobacter sp. R4-368 (50%)
2 1674 bp 53.70 8.06 77.42
NECEvent2014_8_3_scaffold_4262 178_003_scaffold_4262
Order: Enterobacteriales (100%)
3 1255 bp 56.02 6.69 77.45
NECEvent2014_8_3_scaffold_4386 178_003_scaffold_4386
Species: Kosakonia radicincitans (50%)
2 1204 bp 49.67 7.23 77.49
NECEvent2014_8_3_scaffold_2431 178_003_scaffold_2431
Species: Enterobacter sp. R4-368 (50%)
2 2655 bp 51.98 7.18 77.51
NECEvent2014_8_3_scaffold_3796 178_003_scaffold_3796
Species: Enterobacter cancerogenus (50%)
2 1470 bp 52.18 9.08 77.55
NECEvent2014_8_3_scaffold_2966 178_003_scaffold_2966
Species: Kosakonia radicincitans (50%)
2 2050 bp 44.98 5.12 77.56
NECEvent2014_8_3_scaffold_3778 178_003_scaffold_3778
Order: Enterobacteriales (66.67%)
3 1482 bp 43.72 5.67 77.60
NECEvent2014_8_3_scaffold_1976 178_003_scaffold_1976
Order: Enterobacteriales (80%)
5 3537 bp 54.34 10.39 77.61
NECEvent2014_8_3_scaffold_4052 178_003_scaffold_4052
Genus: Enterobacter (66.67%)
3 1348 bp 48.22 6.45 77.67
NECEvent2014_8_3_scaffold_2315 178_003_scaffold_2315
Species: Enterobacteriaceae bacterium strain FGI 57 (50%)
2 2838 bp 49.44 10.10 77.70
NECEvent2014_8_3_scaffold_2452 178_003_scaffold_2452
Order: Enterobacteriales (100%)
3 2628 bp 57.27 7.93 77.74
NECEvent2014_8_3_scaffold_2004 178_003_scaffold_2004
Species: Klebsiella variicola (50%)
4 3448 bp 53.16 8.40 77.87
NECEvent2014_8_3_scaffold_3763 178_003_scaffold_3763
Species: Enterobacter sp. YD4 (100%)
1 1490 bp 56.31 7.65 77.92
NECEvent2014_8_3_scaffold_3403 178_003_scaffold_3403
Species: Shigella sonnei (50%)
2 1705 bp 54.13 9.33 77.95
NECEvent2014_8_3_scaffold_3063 178_003_scaffold_3063
Species: Salmonella enterica (50%)
2 1961 bp 53.90 7.27 78.02
NECEvent2014_8_3_scaffold_4012 178_003_scaffold_4012
Species: Leclercia adecarboxylata (100%)
1 1365 bp 55.75 6.92 78.02
NECEvent2014_8_3_scaffold_3869 178_003_scaffold_3869
Genus: Citrobacter (66.67%)
3 1434 bp 46.93 7.11 78.03
NECEvent2014_8_3_scaffold_2366 178_003_scaffold_2366
Order: Enterobacteriales (100%)
5 2760 bp 49.93 8.37 78.04
NECEvent2014_8_3_scaffold_3097 178_003_scaffold_3097
Order: Enterobacteriales (66.67%)
3 1932 bp 50.00 10.33 78.11
NECEvent2014_8_3_scaffold_2881 178_003_scaffold_2881
Species: Enterobacter sp. YD4 (50%)
4 2132 bp 49.44 6.47 78.24
NECEvent2014_8_3_scaffold_4006 178_003_scaffold_4006
Species: Enterobacter sp. R4-368 (66.67%)
3 1368 bp 53.36 5.92 78.29
NECEvent2014_8_3_scaffold_3341 178_003_scaffold_3341
Species: Kosakonia sacchari (100%)
2 1750 bp 46.40 7.71 78.34
NECEvent2014_8_3_scaffold_2933 178_003_scaffold_2933
Species: Enterobacter sp. R4-368 (100%)
2 2074 bp 51.30 7.09 78.40
Displaying items 201-250 of 1510 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.