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NECEvent2014_8_3_Enterobacteriales_53_8_partial

NECEvent2014_8_3_Enterobacteriales_53_8
In projects: NECEvent2014_8_3

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

ESOM area

Displaying items 401-450 of 1510 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_3_scaffold_2723 178_003_scaffold_2723
Order: Enterobacteriales (100%)
3 2307 bp 55.48 8.45 96.62
NECEvent2014_8_3_scaffold_2765 178_003_scaffold_2765
Genus: Kosakonia (66.67%)
3 2270 bp 54.67 5.81 96.61
NECEvent2014_8_3_scaffold_4841 178_003_scaffold_4841
Species: Kosakonia radicincitans (50%)
2 1031 bp 56.06 5.53 96.61
NECEvent2014_8_3_scaffold_2506 178_003_scaffold_2506
Species: Enterobacter sp. R4-368 (50%)
2 2556 bp 58.76 7.81 96.60
NECEvent2014_8_3_scaffold_2949 178_003_scaffold_2949
Species: Enterobacter sp. YD4 (100%)
1 2063 bp 58.70 9.09 96.56
NECEvent2014_8_3_scaffold_4160 178_003_scaffold_4160
Species: Serratia multitudinisentens (50%)
2 1302 bp 56.68 7.37 96.54
NECEvent2014_8_3_scaffold_4225 178_003_scaffold_4225
Species: Dickeya zeae (100%)
2 1271 bp 56.96 8.26 96.54
NECEvent2014_8_3_scaffold_1934 178_003_scaffold_1934
Species: Shimwellia blattae (75%)
4 3630 bp 55.79 6.32 96.53
NECEvent2014_8_3_scaffold_4119 178_003_scaffold_4119
Species: Citrobacter koseri (50%)
2 1318 bp 51.52 7.17 96.51
NECEvent2014_8_3_scaffold_3191 178_003_scaffold_3191
Genus: Citrobacter (66.67%)
3 1859 bp 57.99 9.28 96.50
NECEvent2014_8_3_scaffold_2574 178_003_scaffold_2574
Genus: Kosakonia (60%)
5 2475 bp 59.31 6.24 96.48
NECEvent2014_8_3_scaffold_3739 178_003_scaffold_3739
Species: Salmonella enterica (100%)
2 1502 bp 50.87 4.99 96.47
NECEvent2014_8_3_scaffold_3762 178_003_scaffold_3762
Order: Enterobacteriales (100%)
3 1490 bp 58.05 6.04 96.44
NECEvent2014_8_3_scaffold_3997 178_003_scaffold_3997
Species: Enterobacter sp. R4-368 (100%)
1 1372 bp 55.03 7.65 96.43
NECEvent2014_8_3_scaffold_2914 178_003_scaffold_2914
Genus: Enterobacter (100%)
3 2091 bp 57.01 5.74 96.41
NECEvent2014_8_3_scaffold_2892 178_003_scaffold_2892
Genus: Enterobacter (66.67%)
3 2113 bp 56.27 9.16 96.40
NECEvent2014_8_3_scaffold_4030 178_003_scaffold_4030
Species: Kosakonia radicincitans (100%)
1 1357 bp 57.77 7.07 96.39
NECEvent2014_8_3_scaffold_1945 178_003_scaffold_1945
Genus: Enterobacter (66.67%)
3 3598 bp 53.25 7.34 96.39
NECEvent2014_8_3_scaffold_4621 178_003_scaffold_4621
Species: Klebsiella oxytoca (100%)
2 1102 bp 57.08 5.99 96.37
NECEvent2014_8_3_scaffold_1971 178_003_scaffold_1971
Order: Enterobacteriales (100%)
3 3546 bp 54.65 6.77 96.36
NECEvent2014_8_3_scaffold_4887 178_003_scaffold_4887
Species: Citrobacter koseri (50%)
2 1015 bp 52.22 6.80 96.35
NECEvent2014_8_3_scaffold_4316 178_003_scaffold_4316
Species: Enterobacter sp. R4-368 (50%)
2 1230 bp 53.25 5.37 96.34
NECEvent2014_8_3_scaffold_4736 178_003_scaffold_4736
Species: Citrobacter rodentium (100%)
1 1065 bp 55.31 8.45 96.34
NECEvent2014_8_3_scaffold_3900 178_003_scaffold_3900
Genus: Citrobacter (66.67%)
3 1417 bp 54.13 9.21 96.33
NECEvent2014_8_3_scaffold_3984 178_003_scaffold_3984
Species: Kosakonia radicincitans (50%)
2 1377 bp 52.65 8.93 96.30
NECEvent2014_8_3_scaffold_3189 178_003_scaffold_3189
Species: Kosakonia sacchari (50%)
2 1860 bp 55.00 7.02 96.29
NECEvent2014_8_3_scaffold_4794 178_003_scaffold_4794
Species: Enterobacter lignolyticus (50%)
2 1047 bp 53.30 8.31 96.28
NECEvent2014_8_3_scaffold_4159 178_003_scaffold_4159
Species: Salmonella enterica (50%)
2 1303 bp 56.10 8.75 96.24
NECEvent2014_8_3_scaffold_1698 178_003_scaffold_1698
Species: Kosakonia radicincitans (66.67%)
3 4291 bp 52.58 7.83 96.20
NECEvent2014_8_3_scaffold_4197 178_003_scaffold_4197
Species: Enterobacter sp. YD4 (50%)
2 1282 bp 54.29 9.13 96.18
NECEvent2014_8_3_scaffold_4273 178_003_scaffold_4273
Species: Enterobacter lignolyticus (66.67%)
3 1251 bp 59.79 6.47 96.16
NECEvent2014_8_3_scaffold_4221 178_003_scaffold_4221
Species: Escherichia vulneris (50%)
2 1273 bp 56.32 10.60 96.15
NECEvent2014_8_3_scaffold_4829 178_003_scaffold_4829
Species: Escherichia coli (100%)
1 1036 bp 54.73 6.95 96.14
NECEvent2014_8_3_scaffold_2026 178_003_scaffold_2026
Genus: Citrobacter (60%)
5 3392 bp 57.58 9.20 96.14
NECEvent2014_8_3_scaffold_2709 178_003_scaffold_2709
Genus: Enterobacter (66.67%)
3 2323 bp 53.72 6.46 96.08
NECEvent2014_8_3_scaffold_1501 178_003_scaffold_1501
Species: Klebsiella pneumoniae (50%)
4 4940 bp 56.64 8.23 96.07
NECEvent2014_8_3_scaffold_2954 178_003_scaffold_2954
Species: Enterobacter sp. R4-368 (50%)
2 2061 bp 52.55 6.84 96.07
NECEvent2014_8_3_scaffold_3991 178_003_scaffold_3991
Species: Enterobacter lignolyticus (50%)
2 1374 bp 52.62 9.17 96.07
NECEvent2014_8_3_scaffold_3334 178_003_scaffold_3334
Species: Enterobacter cloacae (50%)
2 1755 bp 55.21 7.26 96.07
NECEvent2014_8_3_scaffold_4290 178_003_scaffold_4290
Species: Kosakonia radicincitans (100%)
1 1243 bp 54.87 5.19 96.06
NECEvent2014_8_3_scaffold_3914 178_003_scaffold_3914
Species: Klebsiella oxytoca (50%)
2 1409 bp 51.60 7.24 96.03
NECEvent2014_8_3_scaffold_2896 178_003_scaffold_2896
Species: Enterobacter cloacae (50%)
4 2109 bp 54.67 9.53 96.02
NECEvent2014_8_3_scaffold_4699 178_003_scaffold_4699
Species: Citrobacter amalonaticus (50%)
2 1075 bp 54.42 9.07 96.00
NECEvent2014_8_3_scaffold_4872 178_003_scaffold_4872
Species: Kosakonia radicincitans (50%)
2 1022 bp 54.70 4.40 95.99
NECEvent2014_8_3_scaffold_3205 178_003_scaffold_3205
Order: Enterobacteriales (100%)
3 1844 bp 54.12 6.67 95.99
NECEvent2014_8_3_scaffold_3534 178_003_scaffold_3534
Species: Enterobacter sp. R4-368 (50%)
2 1616 bp 51.98 6.96 95.98
NECEvent2014_8_3_scaffold_2950 178_003_scaffold_2950
Species: Enterobacter sp. R4-368 (50%)
2 2063 bp 52.06 9.31 95.98
NECEvent2014_8_3_scaffold_4727 178_003_scaffold_4727
Species: Kosakonia sacchari (100%)
1 1066 bp 57.79 7.46 95.97
NECEvent2014_8_3_scaffold_3227 178_003_scaffold_3227
Species: Escherichia hermannii (100%)
2 1823 bp 55.35 6.42 95.94
NECEvent2014_8_3_scaffold_4491 178_003_scaffold_4491
Order: Enterobacteriales (66.67%)
3 1154 bp 55.11 7.67 95.93
Displaying items 401-450 of 1510 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.