ggKbase home page

NECEvent2014_8_4_scaffold_272

Alias: 178_004_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_272_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..93
DNA (93bp) protein (31aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
Methionine import ATP-binding protein MetN 1 n=1 Tax=Klebsiella pneumoniae BIDMC 24 RepID=V3BED7_KLEPN
ABC transporter
NECEvent2014_8_4_scaffold_272_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86..739
DNA (654bp) protein (218aa)
D-methionine ABC transporter, permease protein n=10 Tax=Klebsiella RepID=B5Y1H3_KLEP3 rbh
DL-methionine transporter permease subunit
D-methionine transport system permease metI {ECO:0000313|EMBL:EWD76855.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" so
NECEvent2014_8_4_scaffold_272_3
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

783..1598
DNA (816bp) protein (272aa)
Lipoprotein n=8 Tax=Klebsiella RepID=B5Y1H4_KLEP3 rbh
metQ; DL-methionine transporter substrate-binding subunit
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
NECEvent2014_8_4_scaffold_272_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1706..2113
DNA (408bp) protein (136aa)
Exopolysaccharide synthesis regulator RcsF n=8 Tax=Klebsiella RepID=B5Y1H5_KLEP3
rcsF; outer membrane lipoprotein
Outer membrane lipoprotein RcsF {ECO:0000256|HAMAP-Rule:MF_00976}; Flags: Precursor;; TaxID=507522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsi
NECEvent2014_8_4_scaffold_272_5
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2110..2817
DNA (708bp) protein (236aa)
Uncharacterized protein n=3 Tax=Klebsiella RepID=B5Y1H6_KLEP3 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEL86992.1}; YaeB protein {ECO:0000313|EMBL:CEP32050.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_8_4_scaffold_272_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2931..3113
DNA (183bp) protein (61aa)
prolyl-tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase n=1 Tax=Enterobacter hormaechei RepID=UPI00030F3C87
NECEvent2014_8_4_scaffold_272_7
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3118..4455
DNA (1338bp) protein (446aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
Proline--tRNA ligase n=6 Tax=Klebsiella RepID=D3RAS8_KLEVT
NECEvent2014_8_4_scaffold_272_8
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4515..5351
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Klebsiella variicola CAG:634 RepID=R5WDP6_9ENTR rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA01418.1}; TaxID=1263083 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; environmental samples.;"
NECEvent2014_8_4_scaffold_272_9
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5482..6180)
DNA (699bp) protein (233aa)
Copper homeostasis protein CutF n=2 Tax=Klebsiella pneumoniae RepID=B5Y1H9_KLEP3 rbh
copper resistance lipoprotein NlpE
Lipoprotein NlpE {ECO:0000313|EMBL:EWD76849.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae
NECEvent2014_8_4_scaffold_272_10
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6223..6636)
DNA (414bp) protein (138aa)
Class I peptide chain release factor n=8 Tax=Klebsiella RepID=D3RAT1_KLEVT
peptidyl-tRNA hydrolase domain-containing protein
YaeJ protein {ECO:0000313|EMBL:CEP32054.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicola.;"
NECEvent2014_8_4_scaffold_272_11
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6633..7178)
DNA (546bp) protein (182aa)
YaeQ family protein n=3 Tax=Klebsiella RepID=D3RAT2_KLEVT rbh
YaeQ family protein
YaeQ family protein {ECO:0000313|EMBL:ADC60054.1}; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variicol
NECEvent2014_8_4_scaffold_272_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7375..7575
DNA (201bp) protein (67aa)
UPF0253 protein Kvar_4178 n=138 Tax=Bacteria RepID=D3RAT3_KLEVT
yaeP; hypothetical protein
UPF0253 protein yaeP {ECO:0000256|HAMAP-Rule:MF_01064}; TaxID=272620 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
NECEvent2014_8_4_scaffold_272_13
Klebsiella sp., Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7562..7822
DNA (261bp) protein (87aa)
Rof protein n=149 Tax=Bacteria RepID=B5Y1I2_KLEP3
Rho-binding antiterminator
Modulator of Rho-dependent transcription termination {ECO:0000313|EMBL:CDQ12740.1}; TaxID=576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.
NECEvent2014_8_4_scaffold_272_14
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7835..9148)
DNA (1314bp) protein (438aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043109}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161, ECO:0000256|SAAS:SAAS00043112};; tRNA(Ile)-2-lysyl-cytidine
tRNA(Ile)-lysidine synthase n=1 Tax=Klebsiella pneumoniae (strain 342) RepID=B5Y1I3_KLEP3 rbh
tilS; tRNA(Ile)-lysidine synthase rbh
NECEvent2014_8_4_scaffold_272_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9202..9591)
DNA (390bp) protein (130aa)
Glyoxalase family protein n=130 Tax=Bacteria RepID=B5Y1I4_KLEP3
lyase
Glyoxylase I family protein {ECO:0000313|EMBL:ESL72803.1}; TaxID=1328397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella
NECEvent2014_8_4_scaffold_272_16
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9638..11827)
DNA (2190bp) protein (730aa)
Lysine decarboxylase, constitutive n=1 Tax=Klebsiella pneumoniae UCICRE 14 RepID=V3D891_KLEPN rbh
Lysine decarboxylase, constitutive {ECO:0000313|EMBL:ESL72802.1}; TaxID=1328397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Kle
lysine decarboxylase 2, constitutive
NECEvent2014_8_4_scaffold_272_17
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11905..12864)
DNA (960bp) protein (320aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=6 Tax=Klebsiella RepID=ACCA_KLEP3 rbh
accA; acetyl-CoA carboxylase carboxyltransferase subunit alpha rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
NECEvent2014_8_4_scaffold_272_18
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13079..16147)
DNA (3069bp) protein (1023aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
DNA polymerase III, alpha subunit n=8 Tax=Klebsiella RepID=B5Y1I7_KLEP3 rbh
dnaE; DNA polymerase III subunit alpha
NECEvent2014_8_4_scaffold_272_19
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16165..16764)
DNA (600bp) protein (200aa)
ribonuclease H (EC:3.1.26.4) rbh
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
Ribonuclease HII n=6 Tax=Klebsiella RepID=RNH2_KLEP3 rbh
NECEvent2014_8_4_scaffold_272_20
Klebsiella variicola CAG:634, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16761..17912)
DNA (1152bp) protein (384aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; TaxID=1263083 species="B
Lipid-A-disaccharide synthase n=1 Tax=Klebsiella variicola CAG:634 RepID=R5WMW3_9ENTR rbh
NECEvent2014_8_4_scaffold_272_21
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17912..18700)
DNA (789bp) protein (263aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=8 Tax=Klebsiella RepID=LPXA_KLEP3 rbh
lpxA; UDP-N-acetylglucosamine acyltransferase
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMA
NECEvent2014_8_4_scaffold_272_22
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18704..19159)
DNA (456bp) protein (152aa)
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC:4.2.1.59)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064869}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00406, ECO:0000256|SAAS:SAAS00064862};; (
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=148 Tax=Bacteria RepID=FABZ_KLEP3 rbh
NECEvent2014_8_4_scaffold_272_23
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19265..20290)
DNA (1026bp) protein (342aa)
lpxD; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; Short=UDP-3-O-(3-OHC14)-GlcN N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523};; EC=2.3.1.191 {ECO:000025
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase n=1 Tax=Klebsiella variicola CAG:634 RepID=R5WZH2_9ENTR rbh
NECEvent2014_8_4_scaffold_272_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20294..20779)
DNA (486bp) protein (162aa)
Chaperone protein skp n=104 Tax=Klebsiella RepID=B5Y1J3_KLEP3 rbh
molecular chaperone
Chaperone protein skp {ECO:0000256|PIRNR:PIRNR002094}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
NECEvent2014_8_4_scaffold_272_25
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20901..23330)
DNA (2430bp) protein (810aa)
Outer membrane protein assembly factor BamA n=7 Tax=Klebsiella RepID=D3RAU6_KLEVT rbh
outer membrane protein assembly complex, YaeT protein
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; En
NECEvent2014_8_4_scaffold_272_26
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23362..24714)
DNA (1353bp) protein (451aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
RIP metalloprotease RseP n=8 Tax=Klebsiella RepID=B5Y1J5_KLEP3 rbh
rseP; zinc metallopeptidase RseP
NECEvent2014_8_4_scaffold_272_27
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24726..25583)
DNA (858bp) protein (286aa)
cdsA; CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=640131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales
Phosphatidate cytidylyltransferase n=7 Tax=Klebsiella RepID=B5Y1J6_KLEP3 rbh
NECEvent2014_8_4_scaffold_272_28
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25596..26357)
DNA (762bp) protein (254aa)
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.31 {ECO:0000256|HAMAP-Rule:MF_01139};; Ditrans,polycis-undecapreny
Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) n=7 Tax=Klebsiella RepID=B5Y1J7_KLEP3 rbh
uppS; undecaprenyl pyrophosphate synthase
NECEvent2014_8_4_scaffold_272_29
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26592..27794)
DNA (1203bp) protein (401aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:00002
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Klebsiella RepID=D3RAV0_KLEVT rbh
NECEvent2014_8_4_scaffold_272_30
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28022..28579)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=147 Tax=Bacteria RepID=RRF_KLEP3 rbh
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1276653 species="Bacteria;
Displaying items 1-30 of 124 in total

View Taxonomy