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NECEvent2014_8_4_scaffold_8

Alias: 178_004_scaffold_8

Search features with annotation key words

Displaying items 31-60 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_8_31
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37679..37939)
DNA (261bp) protein (87aa)
Excinuclease ABC, C subunit domain protein n=2 Tax=Clostridium butyricum RepID=M8J5W5_CLOBU
GIY-YIG domain protein {ECO:0000313|EMBL:KJZ87212.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative endonuclease containing a URI domain
NECEvent2014_8_4_scaffold_8_32
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38151..39812)
DNA (1662bp) protein (554aa)
Ketol-acid reductoisomerase {ECO:0000313|EMBL:KJZ97376.1}; EC=1.1.1.86 {ECO:0000313|EMBL:KJZ97376.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
ilvB1; acetolactate synthase large subunit (EC:2.2.1.6)
UPI0003D677F5 related cluster n=1 Tax=unknown RepID=UPI0003D677F5 rbh
NECEvent2014_8_4_scaffold_8_33
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39980..41638)
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1523154 species="Bacteria; Firmicutes;
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=4 Tax=Clostridium butyricum RepID=B1QZX8_CLOBU rbh
NECEvent2014_8_4_scaffold_8_34
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41645..42727)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QZX7_CLOBU rbh
NECEvent2014_8_4_scaffold_8_35
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42919..43404)
DNA (486bp) protein (162aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
leuD; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=4 Tax=Clostridium butyricum RepID=B1QZX6_CLOBU rbh
NECEvent2014_8_4_scaffold_8_36
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43418..44677)
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
leuC2; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=2 Tax=Clostridium butyricum RepID=M8J5X1_CLOBU rbh
NECEvent2014_8_4_scaffold_8_37
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44692..46287)
DNA (1596bp) protein (532aa)
(R)-citramalate synthase {ECO:0000313|EMBL:KJZ87143.1}; EC=2.3.1.182 {ECO:0000313|EMBL:KJZ87143.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
AIPM/hcit synthase family transferase (EC:2.3.3.-)
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9L0_CLOBU rbh
NECEvent2014_8_4_scaffold_8_38
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46400..46906)
DNA (507bp) protein (169aa)
ilvH; acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridium butyricum RepID=M8K1H5_CLOBU rbh
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ENZ30534.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
NECEvent2014_8_4_scaffold_8_39
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47420..47833)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JET9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87208.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_4_scaffold_8_40
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(48013..49359)
DNA (1347bp) protein (449aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1523154 species="Bacter
Phosphoglucosamine mutase n=2 Tax=Clostridium butyricum RepID=M8JG57_CLOBU rbh
glmM; phosphoglucosamine mutase
NECEvent2014_8_4_scaffold_8_41
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(49609..49923)
DNA (315bp) protein (105aa)
TrpR-like protein YerC/YecD n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSD8_CLOBU
TrpR-like protein YerC/YecD {ECO:0000313|EMBL:ENZ30531.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
TrpR like protein, YerC/YecD
NECEvent2014_8_4_scaffold_8_42
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50016..50852)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSX4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30530.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HTH DNA-binding protein
NECEvent2014_8_4_scaffold_8_43
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51027..53273)
DNA (2247bp) protein (749aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACN2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30529.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptidase M56, BlaR1
NECEvent2014_8_4_scaffold_8_44
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53307..55541)
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A1Z2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30528.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
beta-lactamase regulatory protein 1
NECEvent2014_8_4_scaffold_8_45
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55570..55962)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEF6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30527.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
penicillinase repressor
NECEvent2014_8_4_scaffold_8_46
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56156..56335)
DNA (180bp) protein (60aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QZW5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30526.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_8_47
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56389..57732)
DNA (1344bp) protein (448aa)
Mate efflux family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1I5_CLOBU rbh
MATE efflux family protein {ECO:0000313|EMBL:ENZ30525.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative efflux protein, MATE family
NECEvent2014_8_4_scaffold_8_48
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57930..60104)
DNA (2175bp) protein (725aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEU8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30524.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
NECEvent2014_8_4_scaffold_8_49
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60381..61406)
DNA (1026bp) protein (342aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=4 Tax=Clostridium butyricum RepID=B1QZW2_CLOBU rbh
NECEvent2014_8_4_scaffold_8_50
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(61946..63013)
DNA (1068bp) protein (356aa)
Probable butyrate kinase {ECO:0000256|HAMAP-Rule:MF_00542}; Short=BK {ECO:0000256|HAMAP-Rule:MF_00542};; EC=2.7.2.7 {ECO:0000256|HAMAP-Rule:MF_00542};; Branched-chain carboxylic acid kinase {ECO:00002
buk1; butyrate kinase Buk (EC:2.7.2.7)
Probable butyrate kinase n=4 Tax=Clostridium butyricum RepID=B1QZW1_CLOBU rbh
NECEvent2014_8_4_scaffold_8_51
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(63109..64017)
DNA (909bp) protein (303aa)
Phosphotransbutyrylase {ECO:0000313|EMBL:KJZ87175.1}; EC=2.3.1.19 {ECO:0000313|EMBL:KJZ87175.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
ptb; phosphate butyryltransferase Ptb (EC:2.3.1.19)
Phosphate butyryltransferase n=2 Tax=Clostridium butyricum RepID=M8K9M7_CLOBU rbh
NECEvent2014_8_4_scaffold_8_52
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(64306..65910)
DNA (1605bp) protein (535aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=2 Tax=Clostridium butyricum RepID=M8K1I9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97344.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
FAD-dependent dehydrogenase
NECEvent2014_8_4_scaffold_8_53
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66048..67307)
DNA (1260bp) protein (420aa)
YbbR family protein n=2 Tax=Clostridium butyricum RepID=M8JEV2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97352.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_8_4_scaffold_8_54
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67259..68137)
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JG72_CLOBU rbh
Diadenylate cyclase spyDAC Bacterial checkpoint controller DisA with nucleotide-binding domain {ECO:0000313|EMBL:KJZ87180.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
TIGR00159 family protein
NECEvent2014_8_4_scaffold_8_55
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

68452..69048
DNA (597bp) protein (199aa)
cell wall hydrolase (EC:3.5.1.28)
Cell wall hydrolase, SleB n=2 Tax=Clostridium butyricum RepID=M8J5Z2_CLOBU rbh
Spore cortex-lytic enzyme {ECO:0000313|EMBL:KJZ87232.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_4_scaffold_8_56
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69107..70282)
DNA (1176bp) protein (392aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
iadA; isoaspartyl dipeptidase IadA (EC:3.4.19.-)
Isoaspartyl dipeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9N4_CLOBU rbh
NECEvent2014_8_4_scaffold_8_57
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(70417..71700)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSV9_CLOBU rbh
TPR-repeat-containing protein {ECO:0000313|EMBL:KJZ87182.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA uptake lipoprotein
NECEvent2014_8_4_scaffold_8_58
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(71985..73604)
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI (EC:2.7.3.9) rbh
Phosphoenolpyruvate-protein phosphotransferase n=4 Tax=Clostridium butyricum RepID=B1QZV3_CLOBU rbh
NECEvent2014_8_4_scaffold_8_59
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73830..75035)
DNA (1206bp) protein (402aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
nrdB; ribonucleoside-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=2 Tax=Clostridium butyricum RepID=M8JG76_CLOBU rbh
NECEvent2014_8_4_scaffold_8_60
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75088..77319)
DNA (2232bp) protein (744aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
nrdA; ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=2 Tax=Clostridium butyricum RepID=M8J5Z7_CLOBU rbh
Displaying items 31-60 of 106 in total

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