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NECEvent2014_8_4_scaffold_8

Alias: 178_004_scaffold_8

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_8_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1650)
DNA (1650bp) protein (550aa)
Neopullulanase {ECO:0000313|EMBL:EEP55113.1}; EC=3.2.1.135 {ECO:0000313|EMBL:EEP55113.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
Cyclomaltodextrinase (EC:3.2.1.54)
Neopullulanase n=2 Tax=Clostridium butyricum RepID=B1R037_CLOBU rbh
NECEvent2014_8_4_scaffold_8_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1854..2525
DNA (672bp) protein (224aa)
DNA-bindng response regulator, AraC family n=4 Tax=Clostridium butyricum RepID=B1R036_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30356.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, AraC family
NECEvent2014_8_4_scaffold_8_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2659..4917)
DNA (2259bp) protein (753aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
malP; Maltodextrin phosphorylase (EC:2.4.1.1)
Phosphorylase n=2 Tax=Clostridium butyricum RepID=B1R035_CLOBU rbh
NECEvent2014_8_4_scaffold_8_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5216..5776
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JF72_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87234.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_4_scaffold_8_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5872..6402)
DNA (531bp) protein (177aa)
RDD domain containing protein n=2 Tax=Clostridium butyricum RepID=M8JGI7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30353.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_8_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6389..7384)
DNA (996bp) protein (332aa)
Protease IV {ECO:0000313|EMBL:KJZ87126.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJZ87126.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
sppA; putative signal peptide peptidase SppA (EC:3.4.21.-)
UPI0003A591BF related cluster n=1 Tax=unknown RepID=UPI0003A591BF rbh
NECEvent2014_8_4_scaffold_8_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7654..8205
DNA (552bp) protein (184aa)
Carbonic anhydrase (EC:4.2.1.1)
Carbonate dehydratase n=4 Tax=Clostridium butyricum RepID=B1R031_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97323.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_4_scaffold_8_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8291..9166)
DNA (876bp) protein (292aa)
Aldose 1-epimerase n=2 Tax=Clostridium butyricum RepID=M8K1D5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30350.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
lacX; protein LacX, chromosomal
NECEvent2014_8_4_scaffold_8_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9224..10159)
DNA (936bp) protein (312aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
lacC; tagatose-6-phosphate kinase LacC (EC:2.7.1.144)
Tagatose-6-phosphate kinase n=4 Tax=Clostridium butyricum RepID=B1R029_CLOBU rbh
NECEvent2014_8_4_scaffold_8_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10528..11382)
DNA (855bp) protein (285aa)
Tagatose 1,6-bisphosphate aldolase {ECO:0000313|EMBL:KJZ87150.1}; EC=4.1.2.40 {ECO:0000313|EMBL:KJZ87150.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
Class II aldolase, tagatose bisphosphate family n=3 Tax=Clostridium butyricum RepID=B1R028_CLOBU rbh
NECEvent2014_8_4_scaffold_8_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11427..11945)
DNA (519bp) protein (173aa)
Galactose-6-phosphate isomerase, LacB subunit {ECO:0000313|EMBL:KJZ87228.1}; EC=5.3.1.26 {ECO:0000313|EMBL:KJZ87228.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
lacB; galactose-6-phosphate isomerase subunit LacB (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=4 Tax=Clostridium butyricum RepID=B1R027_CLOBU rbh
NECEvent2014_8_4_scaffold_8_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11967..12392)
DNA (426bp) protein (142aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EEP55490.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EEP55490.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
lacA2; galactose-6-phosphate isomerase subunit LacA (EC:5.3.1.26)
Ribose-5-phosphate isomerase B n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9H5_CLOBU
NECEvent2014_8_4_scaffold_8_13
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12419..13828)
DNA (1410bp) protein (470aa)
PTS system enzyme IIC component n=2 Tax=Clostridium butyricum RepID=B1R025_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97333.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system galactitol/fructose specific transporter subunit IIC
NECEvent2014_8_4_scaffold_8_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13816..14154)
DNA (339bp) protein (113aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:KJZ97386.1}; EC=5.4.2.10 {ECO:0000313|EMBL:KJZ97386.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
PTS system IIB component n=3 Tax=Clostridium butyricum RepID=B1R024_CLOBU
PTS system galactitol/fructose specific transporter subunit IIB
NECEvent2014_8_4_scaffold_8_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14194..14661)
DNA (468bp) protein (156aa)
Pts system enzyme iibc component n=2 Tax=Clostridium butyricum RepID=B1R023_CLOBU rbh
Pts system enzyme iibc component {ECO:0000313|EMBL:EEP55294.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
PTS system galactitol/fructose specific transporter subunit IIBC
NECEvent2014_8_4_scaffold_8_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14793..15551)
DNA (759bp) protein (253aa)
Lactose phosphotransferase system repressor n=3 Tax=Clostridium butyricum RepID=B1R022_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94264.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
lacR; lactose phosphotransferase system repressor
NECEvent2014_8_4_scaffold_8_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16173..17999)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=4 Tax=Clostridium butyricum RepID=B1QZZ5_CLOBU rbh
NECEvent2014_8_4_scaffold_8_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18721..19752)
DNA (1032bp) protein (344aa)
Putative cell wall binding repeat-containing protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K1F3_CLOBU rbh
Putative cell wall binding repeat-containing protein {ECO:0000313|EMBL:EEP55154.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
S-layer protein
NECEvent2014_8_4_scaffold_8_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19883..21184)
DNA (1302bp) protein (434aa)
Putative multidrug efflux pump, outer membrane protein n=3 Tax=Clostridium butyricum RepID=B1QZZ2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:EEP55083.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_8_4_scaffold_8_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21319..24522)
DNA (3204bp) protein (1068aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEI4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30552.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative multidrug efflux pump, membrane protein
NECEvent2014_8_4_scaffold_8_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24527..25777)
DNA (1251bp) protein (417aa)
Putative auxiliary transport protein, MFP family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J5V5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI91666.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
RND family efflux transporter MFP subunit
NECEvent2014_8_4_scaffold_8_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26101..26586
DNA (486bp) protein (162aa)
MarR-family transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QZY9_CLOBU rbh
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ87237.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
MarR-family transcriptional regulator
NECEvent2014_8_4_scaffold_8_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26645..27442)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACQ2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30549.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
endonuclease/exonuclease/phosphatase family protein
NECEvent2014_8_4_scaffold_8_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27448..29103)
DNA (1656bp) protein (552aa)
pts system, iibc component (EC:2.7.1.69)
Pts system, iibc component n=2 Tax=Clostridium butyricum RepID=M8JES7_CLOBU rbh
ATPase component of general energizing module of ECF transporter {ECO:0000313|EMBL:KJZ97379.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_8_4_scaffold_8_25
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29230..30903)
DNA (1674bp) protein (558aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEH8_CLOBU rbh
glycosyl hydrolase family protein
NECEvent2014_8_4_scaffold_8_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31169..32170)
DNA (1002bp) protein (334aa)
Transcriptional regulator, LacI family n=4 Tax=Clostridium butyricum RepID=B1QZY5_CLOBU rbh
Maltose operon transcriptional repressor MalR, LacI family {ECO:0000313|EMBL:KJZ87202.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
alanine racemase
NECEvent2014_8_4_scaffold_8_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32419..33981)
DNA (1563bp) protein (521aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
malQ1; 4-alpha-glucanotransferase MalQ (EC:2.4.1.25)
4-alpha-glucanotransferase n=3 Tax=Clostridium butyricum RepID=M8K9J8_CLOBU rbh
NECEvent2014_8_4_scaffold_8_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34170..35072)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACP7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30544.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_8_4_scaffold_8_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35072..35938)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A210_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30543.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_8_4_scaffold_8_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36034..37350)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEH3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ30542.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
extracellular solute-binding protein
Displaying items 1-30 of 106 in total

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