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NECEvent2014_8_4_scaffold_18

Alias: 178_004_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_18_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..847
DNA (846bp) protein (282aa)
MerR-family transcriptional regulator n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQK6_CLOSA rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD14229.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
MerR-family transcriptional regulator
NECEvent2014_8_4_scaffold_18_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1158..2285
DNA (1128bp) protein (376aa)
UPI0003A320FE related cluster n=1 Tax=unknown RepID=UPI0003A320FE rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87490.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
stage V sporulation protein E
NECEvent2014_8_4_scaffold_18_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2492..2713
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8J7D6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31073.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_4_scaffold_18_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2749..3513
DNA (765bp) protein (255aa)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:KJZ86752.1}; EC=2.7.7.33 {ECO:0000313|EMBL:KJZ86752.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiace
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHQ5_CLOBU rbh
glucose-1-phosphate cytidylyltransferase
NECEvent2014_8_4_scaffold_18_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3507..4502
DNA (996bp) protein (332aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KJZ87497.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KJZ87497.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
YfnG n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGA1_CLOBU rbh
yfnG; sporulation NAD-dependent epimerase/dehydratase YfnG
NECEvent2014_8_4_scaffold_18_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4492..5409
DNA (918bp) protein (306aa)
YfnF n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2Z6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87504.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
glycosyltransferase
NECEvent2014_8_4_scaffold_18_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5431..6594
DNA (1164bp) protein (388aa)
YfnE n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KB64_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31069.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative glycosyltransferase
NECEvent2014_8_4_scaffold_18_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6623..7564
DNA (942bp) protein (314aa)
YfnD n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7D1_CLOBU rbh
YfnD {ECO:0000313|EMBL:EEP55414.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
yfnD; glycosyltransferase
NECEvent2014_8_4_scaffold_18_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8028..8213
DNA (186bp) protein (62aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R115_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87524.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_4_scaffold_18_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8512..9159
DNA (648bp) protein (216aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Clostridium butyricum RepID=B1R117_CLOBU rbh
peptidylprolyl isomerase
NECEvent2014_8_4_scaffold_18_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9431..11359
DNA (1929bp) protein (643aa)
Serine protein kinase n=4 Tax=Clostridium butyricum RepID=B1R118_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31065.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
serine protein kinase PrkA
NECEvent2014_8_4_scaffold_18_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11366..12538
DNA (1173bp) protein (391aa)
UPF0229 protein CBY_4042 n=4 Tax=Clostridium butyricum RepID=B1R119_CLOBU rbh
UPF0229 protein ClosIBUN125C_CONTIG31g01607 {ECO:0000256|HAMAP-Rule:MF_01232}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
yhbH; sporulation protein YhbH
NECEvent2014_8_4_scaffold_18_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12542..13912
DNA (1371bp) protein (457aa)
Stage V sporulation protein R n=3 Tax=Clostridium butyricum RepID=B1R120_CLOBU rbh
Stage V sporulation protein R {ECO:0000313|EMBL:EEP55233.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
spoVR; stage V sporulation protein R rbh
NECEvent2014_8_4_scaffold_18_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14017..14559
DNA (543bp) protein (181aa)
Rubrerythrin n=2 Tax=Clostridium butyricum RepID=M8JHP3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31062.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
rubrerythrin
NECEvent2014_8_4_scaffold_18_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14573..14878
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R122_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP55388.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
NECEvent2014_8_4_scaffold_18_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14942..15304
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R123_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87520.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_4_scaffold_18_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15347..15883)
DNA (537bp) protein (179aa)
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:EEP55597.1}; EC=2.7.8.8 {ECO:0000313|EMBL:EEP55597.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KB51_CLOBU rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase
NECEvent2014_8_4_scaffold_18_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16093..16983
DNA (891bp) protein (297aa)
dagK; diacylglycerol kinase DagK (EC:2.7.1.107)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R125_CLOBU rbh
YegS//BmrU family lipid kinase {ECO:0000313|EMBL:ENZ31058.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
NECEvent2014_8_4_scaffold_18_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17025..17672
DNA (648bp) protein (216aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AG00_CLOBU rbh
Putative membrane protein {ECO:0000313|EMBL:EEP55409.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoN
hypothetical protein
NECEvent2014_8_4_scaffold_18_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17734..18264)
DNA (531bp) protein (177aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R127_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87538.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_4_scaffold_18_21
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18458..20428)
DNA (1971bp) protein (657aa)
UPF0313 protein CBY_4051 n=3 Tax=Clostridium butyricum RepID=B1R128_CLOBU rbh
UPF0313 protein ClosIBUN13A_CONTIG6g00083 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_8_4_scaffold_18_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21163..22410
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AE30_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31054.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
magnesium transporter MgtE
NECEvent2014_8_4_scaffold_18_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22986..23897
DNA (912bp) protein (304aa)
cysK2; cysteine synthase CysK (EC:2.5.1.47)
Cysteine synthase A n=3 Tax=Clostridium butyricum RepID=B1R131_CLOBU rbh
Cysteine synthase {ECO:0000313|EMBL:KHD14208.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_8_4_scaffold_18_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24015..24605
DNA (591bp) protein (197aa)
cysE; serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1R132_CLOBU rbh
Serine acetyltransferase {ECO:0000313|EMBL:KHD14207.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_8_4_scaffold_18_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24616..25647
DNA (1032bp) protein (344aa)
Iron-sulfur cluster-binding protein n=4 Tax=Clostridium butyricum RepID=B1R133_CLOBU rbh
Epoxyqueuosine (OQ) reductase QueG {ECO:0000313|EMBL:KJZ87482.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
iron-sulfur cluster-binding protein
NECEvent2014_8_4_scaffold_18_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25817..26521
DNA (705bp) protein (235aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KJZ86740.1}; EC=2.3.1.51 {ECO:0000313|EMBL:KJZ86740.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
plsD; glycerol-3-phosphate O-acyltransferase PlsD (EC:2.3.1.15)
Glycerol-3-phosphate O-acyltransferase n=2 Tax=Clostridium butyricum RepID=M8KB41_CLOBU rbh
NECEvent2014_8_4_scaffold_18_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26534..27154
DNA (621bp) protein (207aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=3 Tax=Clostridium butyricum RepID=B1R135_CLOBU rbh
NECEvent2014_8_4_scaffold_18_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27261..28166
DNA (906bp) protein (302aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
ddl; D-alanine--D-alanine ligase Ddl (EC:6.3.2.4)
D-alanine--D-alanine ligase n=4 Tax=Clostridium butyricum RepID=B1R136_CLOBU rbh
NECEvent2014_8_4_scaffold_18_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28321..29028
DNA (708bp) protein (236aa)
Regulatory protein VanR n=4 Tax=Clostridium butyricum RepID=B1R137_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ31047.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
two component transcriptional regulator
NECEvent2014_8_4_scaffold_18_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29045..30535
DNA (1491bp) protein (497aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
Sensory transduction protein kinase n=3 Tax=Clostridium butyricum RepID=B1R138_CLOBU rbh
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 79 in total

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