ggKbase home page

NECEvent2014_8_4_scaffold_95

Alias: 178_004_scaffold_95

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_95_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..405)
DNA (405bp) protein (135aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EEP53677.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEP53677.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
sudA: sulfide dehydrogenase subunit alpha (EC:1.8.-.- 1.18.1.2)
Glutamate synthase , homotetrameric n=4 Tax=Clostridium butyricum RepID=B1QWW4_CLOBU
NECEvent2014_8_4_scaffold_95_2
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(405..1295)
DNA (891bp) protein (297aa)
gltD; ferredoxin-NADP(+) reductase subunit alpha (EC:1.4.1.13)
Ferredoxin-NADP+ reductase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH82_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ85795.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_4_scaffold_95_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1473..2693)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUM1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35692.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
histidine kinase
NECEvent2014_8_4_scaffold_95_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2708..3952)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z776_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83743.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
signal transduction histidine kinase regulating citrate/malate metabolism
NECEvent2014_8_4_scaffold_95_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4208..4768
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7N3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83730.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
methyltransferase type 11
NECEvent2014_8_4_scaffold_95_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4852..5007)
DNA (156bp) protein (52aa)
UPI0003D64AAC related cluster n=1 Tax=unknown RepID=UPI0003D64AAC
Uncharacterized protein {ECO:0000313|EMBL:KJZ85318.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_8_4_scaffold_95_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5238..6419)
DNA (1182bp) protein (394aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01
phnW; 2-aminoethylphosphonate--pyruvate transaminase PhnW (EC:2.6.1.37)
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AH78_CLOBU rbh
NECEvent2014_8_4_scaffold_95_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6462..7595)
DNA (1134bp) protein (378aa)
bcpC; phosphonopyruvate decarboxylase BcpC (EC:4.1.1.82)
Phosphonopyruvate decarboxylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUL2_CLOBU rbh
Phosphonopyruvate decarboxylase {ECO:0000313|EMBL:ENZ35687.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3
NECEvent2014_8_4_scaffold_95_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7666..8964)
DNA (1299bp) protein (433aa)
Phosphoenolpyruvate phosphomutase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z767_CLOBU rbh
Phosphoenolpyruvate phosphomutase {ECO:0000313|EMBL:ENZ35686.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E
cytidyltransferase-like protein
NECEvent2014_8_4_scaffold_95_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9008..9787)
DNA (780bp) protein (260aa)
Nucleotidyl transferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI41_CLOBU rbh
Nucleotidyl transferase/aminotransferase, class V {ECO:0000313|EMBL:KJZ83771.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
nucleotidyl transferase
NECEvent2014_8_4_scaffold_95_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10050..11063)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ASJ7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83764.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_4_scaffold_95_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11388..12644)
DNA (1257bp) protein (419aa)
Surface protein PspC n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBJ5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35683.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cell wall binding repeat-containing protein
NECEvent2014_8_4_scaffold_95_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12787..14160)
DNA (1374bp) protein (458aa)
Sodium:dicarboxylate symporter n=3 Tax=Clostridium butyricum RepID=C4IHD8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35682.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sodium:dicarboxylate symporter family protein
NECEvent2014_8_4_scaffold_95_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14295..15230)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z752_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83765.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
succinylglutamate desuccinylase/aspartoacylase
NECEvent2014_8_4_scaffold_95_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15441..16022)
DNA (582bp) protein (194aa)
TetR family transcriptional regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7L2_CLOBU rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:ENZ35680.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
TetR family transcriptional regulator
NECEvent2014_8_4_scaffold_95_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16167..16790)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASI6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35679.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_95_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16952..17833)
DNA (882bp) protein (294aa)
Metallo-beta-lactamase superfamily exported protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCF0_CLOBU rbh
ComE-like protein, Metallo beta-lactamase superfamily hydrolase, secreted {ECO:0000313|EMBL:KJZ83767.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
metallo-beta-lactamase superfamily exported protein
NECEvent2014_8_4_scaffold_95_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18029..18886
DNA (858bp) protein (286aa)
Msm operon regulatory protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMV1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96373.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DNA-binding domain-containing protein, AraC-type
NECEvent2014_8_4_scaffold_95_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19011..22037)
DNA (3027bp) protein (1009aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154};
cbgA; beta-galactosidase CbgA (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z745_CLOBU rbh
NECEvent2014_8_4_scaffold_95_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22085..23155)
DNA (1071bp) protein (357aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=997898 species="Bacteria; Firmicutes; Clost
mro; aldose 1-epimerase Mro (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7K7_CLOBU rbh
NECEvent2014_8_4_scaffold_95_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23331..24878
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASI0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35674.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
two component transcriptional regulator, AraC family
NECEvent2014_8_4_scaffold_95_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24910..26703
DNA (1794bp) protein (598aa)
Sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JCE5_CLOBU rbh
Histidine kinase {ECO:0000313|EMBL:KHD16513.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
histidine kinase internal region
NECEvent2014_8_4_scaffold_95_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26757..28451)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUI3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35672.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
NECEvent2014_8_4_scaffold_95_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28599..30683)
DNA (2085bp) protein (695aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=997898 species="Bacteria; Firmicutes; Clostridi
pbg; beta-galactosidase Pbg (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z738_CLOBU rbh
NECEvent2014_8_4_scaffold_95_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30851..31693)
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=2 Tax=Clostridium butyricum RepID=M8K838_CLOBU rbh
Alpha-arabinosides ABC transport system, permease protein AraQ {ECO:0000313|EMBL:KJZ83770.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
binding-protein-dependent transport systems inner membrane component
NECEvent2014_8_4_scaffold_95_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31686..32579)
DNA (894bp) protein (298aa)
L-arabinose transport system permease protein AraP n=4 Tax=Clostridium butyricum RepID=B1QWE9_CLOBU rbh
L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:EEP53858.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
binding-protein-dependent transport systems inner membrane component
NECEvent2014_8_4_scaffold_95_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32745..34049)
DNA (1305bp) protein (435aa)
Putative arabinose-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCE1_CLOBU rbh
ABC transporter sugar binding protein {ECO:0000313|EMBL:KJZ83759.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN
extracellular solute-binding protein
Displaying 27 items

View Taxonomy