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NECEvent2014_8_4_scaffold_133

Alias: 178_004_scaffold_133

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_133_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89..1282)
DNA (1194bp) protein (398aa)
Aspartate aminotransferase n=2 Tax=Clostridium butyricum RepID=M8K2P2_CLOBU rbh
Aspartate aminotransferase {ECO:0000313|EMBL:KHD15836.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
class I and II aminotransferase
NECEvent2014_8_4_scaffold_133_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1729..2082)
DNA (354bp) protein (118aa)
UPI0003D59E5E related cluster n=1 Tax=unknown RepID=UPI0003D59E5E
Uncharacterized protein {ECO:0000313|EMBL:ETI89151.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
NECEvent2014_8_4_scaffold_133_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2275..5784)
DNA (3510bp) protein (1170aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
nifJ2; pyruvate-flavodoxin oxidoreductase NifJ (EC:1.2.7.-)
UPI0003D61FD3 related cluster n=1 Tax=unknown RepID=UPI0003D61FD3 rbh
NECEvent2014_8_4_scaffold_133_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6000..6425)
DNA (426bp) protein (142aa)
UPI0003D64940 related cluster n=1 Tax=unknown RepID=UPI0003D64940
Flavodoxin {ECO:0000313|EMBL:KHD15839.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative flavoprotein
NECEvent2014_8_4_scaffold_133_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6578..7630)
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:
UPI0003D67F78 related cluster n=1 Tax=unknown RepID=UPI0003D67F78 rbh
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
NECEvent2014_8_4_scaffold_133_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8067..9833)
DNA (1767bp) protein (589aa)
recJ2; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
UPI0003D5B1A8 related cluster n=1 Tax=unknown RepID=UPI0003D5B1A8 rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ETI89155.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_4_scaffold_133_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9896..10450)
DNA (555bp) protein (185aa)
UPI0003AAC03D related cluster n=1 Tax=unknown RepID=UPI0003AAC03D rbh
DJ-1/YajL/PfpI superfamily protein {ECO:0000313|EMBL:KJZ87576.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
DJ-1 family protein
NECEvent2014_8_4_scaffold_133_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10647..13562)
DNA (2916bp) protein (972aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
UPI0003D64CB9 related cluster n=1 Tax=unknown RepID=UPI0003D64CB9 rbh
DNA topoisomerase IV subunit A
NECEvent2014_8_4_scaffold_133_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13607..15556)
DNA (1950bp) protein (650aa)
UPI0003D5F1BB related cluster n=1 Tax=unknown RepID=UPI0003D5F1BB rbh
DNA gyrase subunit B {ECO:0000313|EMBL:KHD15844.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
DNA topoisomerase IV subunit B
NECEvent2014_8_4_scaffold_133_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16133..17521)
DNA (1389bp) protein (463aa)
Glycosyl transferase, family 2 n=2 Tax=Clostridium butyricum RepID=M8KAV9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31510.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycosyl transferase family protein
NECEvent2014_8_4_scaffold_133_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17922..19268)
DNA (1347bp) protein (449aa)
gluD; glutamate dehydrogenase (EC:1.4.1.2)
UPI0003D5B0C3 related cluster n=1 Tax=unknown RepID=UPI0003D5B0C3 rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_8_4_scaffold_133_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19447..20082)
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AH88_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87570.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_8_4_scaffold_133_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20140..21204)
DNA (1065bp) protein (355aa)
gluP; rhomboid protease GluP (EC:3.4.21.105)
UPI0003D61AEF related cluster n=1 Tax=unknown RepID=UPI0003D61AEF rbh
Rhomboid family protein {ECO:0000313|EMBL:ETI89162.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_8_4_scaffold_133_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21359..23146)
DNA (1788bp) protein (596aa)
yjbG; oligoendopeptidase F (EC:3.4.24.-)
UPI0003D60C75 related cluster n=1 Tax=unknown RepID=UPI0003D60C75 rbh
Oligoendopeptidase F {ECO:0000313|EMBL:KHD15849.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_8_4_scaffold_133_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23192..23593)
DNA (402bp) protein (134aa)
UPI0003D5C684 related cluster n=1 Tax=unknown RepID=UPI0003D5C684
Uncharacterized protein {ECO:0000313|EMBL:KHD15850.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_8_4_scaffold_133_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23922..24332
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=M8K2Q5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30978.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_133_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24464..24694)
DNA (231bp) protein (77aa)
D-alanine--poly(phosphoribitol) ligase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00565}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00565};; D-alanyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00565}; TaxID=15
D-alanine--poly(phosphoribitol) ligase, subunit 2 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2 n=4 Tax=Clostridium butyricum RepID=B1QXD7_CLOBU
NECEvent2014_8_4_scaffold_133_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24803..25957)
DNA (1155bp) protein (385aa)
UPI00039D4D67 related cluster n=1 Tax=unknown RepID=UPI00039D4D67 rbh
D-alanyl transfer protein DltB {ECO:0000313|EMBL:KJZ87552.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
membrane bound O-acyl transferase, MBOAT family protein
NECEvent2014_8_4_scaffold_133_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25954..27471)
DNA (1518bp) protein (506aa)
D-alanine--poly(phosphoribitol) ligase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00593}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00593};; D-alanine-D-alanyl carrier protein ligase {ECO:0000256|HAMAP-Rule:MF
dltA2; D-alanine--poly(phosphoribitol) ligase subunit 1 (EC:6.1.1.13)
UPI0003D61AFD related cluster n=1 Tax=unknown RepID=UPI0003D61AFD rbh
NECEvent2014_8_4_scaffold_133_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27595..28776)
DNA (1182bp) protein (394aa)
UPI0003D618B4 related cluster n=1 Tax=unknown RepID=UPI0003D618B4 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI89169.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
dltD1; D-alanyl-lipoteichoic acid biosynthesis protein DltD
NECEvent2014_8_4_scaffold_133_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28814..28891
DNA (78bp) protein (26aa)
UPI0003D618B4 related cluster n=1 Tax=unknown RepID=UPI0003D618B4
Poly(Glycerophosphate chain) D-alanine transfer protein DltD {ECO:0000313|EMBL:KJZ87551.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
Displaying 21 items

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