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NECEvent2014_8_4_scaffold_144

Alias: 178_004_scaffold_144

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_144_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

158..595
DNA (438bp) protein (146aa)
MarR-family transcriptional regulator n=2 Tax=Clostridium butyricum RepID=M8K0K8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32277.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
MarR family transcriptional regulator
NECEvent2014_8_4_scaffold_144_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(637..1275)
DNA (639bp) protein (213aa)
UPI0003AA5D49 related cluster n=1 Tax=unknown RepID=UPI0003AA5D49 rbh
Nitroreductase family protein {ECO:0000313|EMBL:ETI87696.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1
nitroreductase
NECEvent2014_8_4_scaffold_144_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1510..4611)
DNA (3102bp) protein (1034aa)
Acriflavin resistance protein n=2 Tax=Clostridium butyricum RepID=M8J4Y3_CLOBU rbh
RND multidrug efflux transporter Acriflavin resistance protein {ECO:0000313|EMBL:KJZ84006.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
nolG3; nodulation protein NolG
NECEvent2014_8_4_scaffold_144_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4624..5910)
DNA (1287bp) protein (429aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Clostridium butyricum RepID=C4IBW6_CLOBU rbh
Hemolysin D {ECO:0000313|EMBL:KHD14126.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RND family efflux transporter MFP subunit
NECEvent2014_8_4_scaffold_144_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6080..7273
DNA (1194bp) protein (398aa)
UPI0003D5D381 related cluster n=1 Tax=unknown RepID=UPI0003D5D381 rbh
Histidine kinase protein {ECO:0000313|EMBL:ETI87698.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
integral membrane sensor signal transduction histidine kinase
NECEvent2014_8_4_scaffold_144_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7363..7935
DNA (573bp) protein (191aa)
Transcriptional regulatory protein DegU n=2 Tax=Clostridium butyricum RepID=B1R0Q1_CLOBU rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD14124.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;
two component transcriptional regulator, LuxR family
NECEvent2014_8_4_scaffold_144_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8061..8945)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A778_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ93305.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
RpiR family transcriptional regulator
NECEvent2014_8_4_scaffold_144_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9309..10046
DNA (738bp) protein (246aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHP0_CLOBU rbh
NECEvent2014_8_4_scaffold_144_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10192..11028)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXY7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84025.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative short-chain dehydrogenase
NECEvent2014_8_4_scaffold_144_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11421..12767)
DNA (1347bp) protein (449aa)
UPI0003D5CD5B related cluster n=1 Tax=unknown RepID=UPI0003D5CD5B rbh
Berberine family protein {ECO:0000313|EMBL:ETI87701.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
berberine and berberine like family protein
NECEvent2014_8_4_scaffold_144_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13042..14334)
DNA (1293bp) protein (431aa)
Uracil permease n=3 Tax=Clostridium butyricum RepID=B1R0P8_CLOBU rbh
Uracil permease {ECO:0000313|EMBL:KJZ84018.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
uracil transporter
NECEvent2014_8_4_scaffold_144_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14672..15832)
DNA (1161bp) protein (387aa)
UPI0003D5DD95 related cluster n=1 Tax=unknown RepID=UPI0003D5DD95 rbh
MFS transporter {ECO:0000313|EMBL:KHD14598.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
fucose permease
NECEvent2014_8_4_scaffold_144_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15941..16834
DNA (894bp) protein (298aa)
UPI0003D5D001 related cluster n=1 Tax=unknown RepID=UPI0003D5D001 rbh
Xylose operon regulatory protein {ECO:0000313|EMBL:KJZ84043.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_8_4_scaffold_144_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16930..18771)
DNA (1842bp) protein (614aa)
UPI0003D5B655 related cluster n=1 Tax=unknown RepID=UPI0003D5B655 rbh
ABC transporter {ECO:0000313|EMBL:KHD14595.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC transport system ATP-binding and permease protein
NECEvent2014_8_4_scaffold_144_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18776..20503)
DNA (1728bp) protein (576aa)
UPI0003D6893F related cluster n=1 Tax=unknown RepID=UPI0003D6893F rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ84010.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ABC transport system ATP-binding and permease protein
NECEvent2014_8_4_scaffold_144_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20613..21413
DNA (801bp) protein (267aa)
UPI0003D6677A related cluster n=1 Tax=unknown RepID=UPI0003D6677A rbh
Transcriptional regulator, MerR family {ECO:0000313|EMBL:KJZ84048.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
bltR; transcriptional regulator
NECEvent2014_8_4_scaffold_144_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21447..22724)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A787_CLOBU rbh
Putative ABC transporter, permease protein {ECO:0000313|EMBL:KJZ84014.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
major facilitator superfamily transporter
NECEvent2014_8_4_scaffold_144_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22721..23515)
DNA (795bp) protein (265aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
UPI0003A1ABBD related cluster n=1 Tax=unknown RepID=UPI0003A1ABBD rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ93310.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_4_scaffold_144_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23518..24525)
DNA (1008bp) protein (336aa)
UPI0003D626BE related cluster n=1 Tax=unknown RepID=UPI0003D626BE rbh
ABC-type Fe3+-siderophore transport system, permease 2 component {ECO:0000313|EMBL:KJZ87777.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
transport system permease
NECEvent2014_8_4_scaffold_144_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24525..25517)
DNA (993bp) protein (331aa)
UPI0003D61302 related cluster n=1 Tax=unknown RepID=UPI0003D61302 rbh
Ferrichrome ABC transporter permease {ECO:0000313|EMBL:KHD14589.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative membrane protein
NECEvent2014_8_4_scaffold_144_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25504..26454)
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JF63_CLOBU rbh
Ferrichrome-binding periplasmic protein {ECO:0000313|EMBL:KJZ84023.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
putative secreted protein
NECEvent2014_8_4_scaffold_144_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26726..27730
DNA (1005bp) protein (335aa)
Helix-turn-helix domain-containing protein n=2 Tax=Clostridium butyricum RepID=M8JDU3_CLOBU rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:KJZ84042.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
hypothetical protein
Displaying 22 items

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