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NECEvent2014_8_4_scaffold_223

Alias: 178_004_scaffold_223

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_223_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

155..688
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A6S3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32138.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UBA/TS-N domain-containing protein
NECEvent2014_8_4_scaffold_223_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

828..1361
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ38_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32137.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UBA/TS-N domain-containing protein
NECEvent2014_8_4_scaffold_223_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1365..2045
DNA (681bp) protein (227aa)
Two-component system response regulator n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWZ9_CLOBU rbh
Two-component system response regulator {ECO:0000313|EMBL:ENZ32136.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
DNA-binding response regulator
NECEvent2014_8_4_scaffold_223_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2038..3300
DNA (1263bp) protein (421aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXK0_CLOBU rbh
sensor histidine kinase
NECEvent2014_8_4_scaffold_223_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3453..3842
DNA (390bp) protein (130aa)
MerR-family transcriptional regulator n=4 Tax=Clostridium butyricum RepID=B1QUQ8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32134.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_223_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3919..4761)
DNA (843bp) protein (281aa)
Nitroreductase family protein n=2 Tax=Clostridium butyricum RepID=M8JET8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89599.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
nitroreductase family protein fused to ferredoxin domain
NECEvent2014_8_4_scaffold_223_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5133..6008
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ33_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32132.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
bacterial regulatory helix-turn-helix , lysR family protein
NECEvent2014_8_4_scaffold_223_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6125..7060
DNA (936bp) protein (312aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostr
tRNA-dihydrouridine synthase (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K873_CLOBU rbh
NECEvent2014_8_4_scaffold_223_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7450..8601
DNA (1152bp) protein (384aa)
Multiple sugar-binding transport ATP-binding protein MsmK n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JDG7_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32130.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_8_4_scaffold_223_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8594..9457
DNA (864bp) protein (288aa)
Glycerol-3-phosphate ABC transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEU3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89596.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_8_4_scaffold_223_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9457..10392
DNA (936bp) protein (312aa)
Sugar permease n=4 Tax=Clostridium butyricum RepID=B1QUQ2_CLOBU rbh
Sugar permease {ECO:0000313|EMBL:EEP56199.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_8_4_scaffold_223_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10452..11801
DNA (1350bp) protein (450aa)
sn-glycerol 3-phosphate ABC transporter substrate-binding protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ28_CLOBU rbh
sn-glycerol 3-phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ32127.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
NECEvent2014_8_4_scaffold_223_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12117..12272
DNA (156bp) protein (52aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum 60E.3 RepID=N9YWY9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32126.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_8_4_scaffold_223_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12466..12723
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QUP9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84080.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
helix-turn-helix domain of resolvase
NECEvent2014_8_4_scaffold_223_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12823..13536)
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AH81_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84207.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
proton-coupled thiamine transporter YuaJ
NECEvent2014_8_4_scaffold_223_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13897..14136)
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QUP7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89602.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_8_4_scaffold_223_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14529..15308
DNA (780bp) protein (260aa)
Metal-dependent phosphohydrolase, HD subdomain n=4 Tax=Clostridium butyricum RepID=B1QUP6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ32122.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_8_4_scaffold_223_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15463..16317
DNA (855bp) protein (285aa)
HAD phosphatase superfamily protein n=2 Tax=Clostridium butyricum RepID=M8K064_CLOBU rbh
Cof-like hydrolase {ECO:0000313|EMBL:ENZ32121.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
cof family hydrolase
NECEvent2014_8_4_scaffold_223_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16357..17217
DNA (861bp) protein (287aa)
Phosphosugar-binding transcriptional regulator, RpiR family n=2 Tax=Clostridium butyricum RepID=M8JDH7_CLOBU rbh
Phosphosugar-binding transcriptional regulator, RpiR family {ECO:0000313|EMBL:KJZ84104.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
RpiR family transcriptional regulator
NECEvent2014_8_4_scaffold_223_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17764..17940
DNA (177bp) protein (59aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QUP3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84191.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_4_scaffold_223_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17885..19228
DNA (1344bp) protein (448aa)
UPI0003D5CBCD related cluster n=1 Tax=unknown RepID=UPI0003D5CBCD rbh
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
mgtE; magnesium transporter
NECEvent2014_8_4_scaffold_223_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19593..20543
DNA (951bp) protein (317aa)
Xylanase/chitin deacetylase, NodB family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEN0_CLOBU rbh
Xylanase/chitin deacetylase, NodB family {ECO:0000313|EMBL:EEP56396.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyri
xylanase/chitin deacetylase
Displaying 22 items

View Taxonomy