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NECEvent2014_8_4_scaffold_285

Alias: 178_004_scaffold_285

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_285_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(57..1097)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KC50_CLOBU rbh
No significant putative N-terminal signal sequence was found by PSORT {ECO:0000313|EMBL:KJZ83050.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
hypothetical protein
NECEvent2014_8_4_scaffold_285_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1118..2164)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AHK6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83049.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
exopolysaccharide biosynthesis protein
NECEvent2014_8_4_scaffold_285_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2485..3453
DNA (969bp) protein (323aa)
birA; bifunctional protein BirA (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AV01_CLOBU rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
NECEvent2014_8_4_scaffold_285_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3652..4047)
DNA (396bp) protein (132aa)
Thioesterase family protein n=4 Tax=Clostridium butyricum RepID=B1QTQ7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35846.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
thioesterase family protein
NECEvent2014_8_4_scaffold_285_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4244..5257)
DNA (1014bp) protein (338aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=4 Tax=Clostridium butyricum RepID=B1QTQ9_CLOBU rbh
NECEvent2014_8_4_scaffold_285_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5577..6530)
DNA (954bp) protein (318aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1523154 species="Bacteria; Firmicutes;
ldh1; L-lactate dehydrogenase Ldh (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASV8_CLOBU rbh
NECEvent2014_8_4_scaffold_285_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6765..7382
DNA (618bp) protein (206aa)
Exonuclease n=4 Tax=Clostridium butyricum RepID=B1QTR1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ35843.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
exonuclease, RNase T and DNA polymerase III
NECEvent2014_8_4_scaffold_285_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7749..8459)
DNA (711bp) protein (237aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J889_CLOBU rbh
pyruvate formate-lyase activating enzyme
NECEvent2014_8_4_scaffold_285_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8673..10904)
DNA (2232bp) protein (744aa)
pflB; formate acetyltransferase (EC:2.3.1.54)
Formate acetyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ83131.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_8_4_scaffold_285_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11576..12250)
DNA (675bp) protein (225aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
pyrE; orotate phosphoribosyltransferase PyrE (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTR5_CLOBU rbh
NECEvent2014_8_4_scaffold_285_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12284..13180)
DNA (897bp) protein (299aa)
pyrD; dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit (EC:1.3.1.14)
Dihydroorotate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QTR6_CLOBU rbh
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
NECEvent2014_8_4_scaffold_285_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13200..13943)
DNA (744bp) protein (248aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Clostridium butyricum RepID=M8JIP9_CLOBU rbh
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=15231
pyrK; dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
NECEvent2014_8_4_scaffold_285_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14136..15008)
DNA (873bp) protein (291aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase
pyrF; orotidine 5'-phosphate decarboxylase PyrF (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=4 Tax=Clostridium butyricum RepID=B1QTR8_CLOBU rbh
NECEvent2014_8_4_scaffold_285_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15050..16249)
DNA (1200bp) protein (400aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS0008
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase n=2 Tax=Clostridium butyricum RepID=M8KC59_CLOBU rbh
NECEvent2014_8_4_scaffold_285_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16400..16822)
DNA (423bp) protein (141aa)
Aspartate carbamoyltransferase regulatory chain n=4 Tax=Clostridium butyricum RepID=B1QTS0_CLOBU
Aspartate carbamoyltransferase regulatory chain (PyrI) {ECO:0000313|EMBL:KJZ83185.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
aspartate carbamoyltransferase regulatory subunit
NECEvent2014_8_4_scaffold_285_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16823..17749)
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1523154 species="Ba
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH98_CLOBU rbh
Displaying 16 items

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