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NECEvent2014_8_4_scaffold_662_9

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 7742..9550

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 603.0
  • Bit_score: 1205
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 603.0
  • Bit_score: 1205
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJT2_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 603.0
  • Bit_score: 1206
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1809
TTGTTCGAATTAAATAATTTTGATGCTTTACAAATCGGGTTAGCATCTCCAGAACAAATTAGAGAGTGGTCTAGAGGAGAAGTAAAGAAACCTGAAACTATTAACTATAGAACGTTAAAACCTGAGAGAGACGGATTATTCTGTGAAAGAATATTCGGACCTATAAAAGACTGGGAATGTCACTGTGGAAAATACAAAAGAGTTAGATATAAAGGTATTGTATGTGACAGATGTGGTGTTGAAGTAACTAAATCTAAAGTTAGAAGAGAGAGAATGGCTCACATTGAATTAGCTGCGCCAGTATCTCATATATGGTATTTCAAAGGAATACCTTCAAGAATGGGATTAATCCTTGATATGTCACCAAGAGCTTTAGAAAAAGTTCTATATTTTGCATCATATATAGTTATAGATCCAAAAGAAACTTCATTATTAAAGAAACAACTTCTTAATGAGAAAGAATATAGAGAAGCGTGTGATAAATATGGTGAAGAGAGCTTTGTAGCTGGAATGGGTGCAGAAGCTATAAAAACTTTATTATCAGAAATAGACTTAGAAAGAACTGCTGCTGAACTTAAAGAAGAATTAAAGCAAAGCACAGGTCAAAAGAAAGTTAGAATAATAAGAAGATTAGAAGTTGTAGAATCATTCAAATCATCAGGAAATAAACCTGAATGGATGGTAGTAGATGTAATACCAGTTATACCACCTGATTTAAGACCTATGGTTCAATTAGATGGAGGTAGATTTGCTACTTCAGATTTAAATGATTTATATAGAAGAGTTATAAATAGAAATAACAGACTTAAGAAGTTATTAGACCTTGGCGCTCCTGACATAATAGTTAGAAACGAAAAGAGAATGCTTCAAGAGGCTGTAGATGCTTTAATAGATAACGGTAGAAGAGGAAGACCTGTAACTGGTCCTGGAAACAGACCTCTTAAATCATTATCAGATATGCTTAAAGGTAAGCAAGGAAGATTCAGACAAAACCTTCTTGGTAAGAGGGTTGACTATTCAGGAAGATCAGTTATCGTTGTTGGTCCTGAATTAAAAATGTATCAATGTGGTCTTCCAAAAGAAATGGCTTTAGAATTATTCAAGCCTTTCGTTATGAAGAAATTAGTTGAAGACGGAGTTGCTCATAACATAAAGAGTGCTAAGAGAATGGTTGAAAGAGTAATGCCACAAGTATGGGATGTACTTGAAGAAGTTATAGCAGACCATCCAGTATTACTAAACAGAGCACCTACTCTACATAGACTAGGTATTCAAGCATTCCAACCAGTATTAGTTGAAGGTAGAGCTATAAAACTTCATCCACTTGTATGTACAGCATATAACGCTGACTTCGATGGAGACCAAATGGCTGTTCACGTACCTTTATCAGTTGAAGCTCAAGCAGAAGCTAGATTCTTAATGCTTGCAGCAGGTAATATAATGAAACCTTCTGATGGTAGACCAGTTTGTGTACCTACTCAGGATATGGTTCTTGGTTCATATTACTTAACAATGGATAAAGACGGAGCTAAAGGTGAAGGAAAATACTTCGCATCATTTGATGAAGTAATAATGGCTTACCAATTAAAAGAAGTTGATATTCATGCTAAGATTAACGTTAAAGTTACTAAAGAAATAGATGGAGAGCTTAAGTCAGGAATAATCAAAACAACTCCAGGATTTATAATATTCAATGAATGTATACCTCAAGACCTAGGTTTTGTAAATAGAGAAAATCCTGAAGAAATGTTCAATTTAGAAATAGATTTCTTAATAACTAAAAAGTCATTAGGAAAAATAATAGATAAA
PROTEIN sequence
Length: 603
LFELNNFDALQIGLASPEQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMAHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKVLYFASYIVIDPKETSLLKKQLLNEKEYREACDKYGEESFVAGMGAEAIKTLLSEIDLERTAAELKEELKQSTGQKKVRIIRRLEVVESFKSSGNKPEWMVVDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNIMKPSDGRPVCVPTQDMVLGSYYLTMDKDGAKGEGKYFASFDEVIMAYQLKEVDIHAKINVKVTKEIDGELKSGIIKTTPGFIIFNECIPQDLGFVNRENPEEMFNLEIDFLITKKSLGKIIDK