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NECEvent2014_8_4_scaffold_4600_1

Organism: NECEvent2014_8_4_Clostridium_perfringens_30_8

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(1..213)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=10 Tax=Clostridium perfringens RepID=Q8XJJ5_CLOPE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 2.10e-30
sigG; sporulation sigma factor SigG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 6.00e-31
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (stra similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 3.00e-30

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 213
ATGCGGAAGGGAATTACTTCGAAGGGGTTGATTTCAATTATGATGATAAATAAAGTAGAAATATGTGGAGTCAATACAGCTAAATTACCAGTTTTAAAAGAAAAAGAAATGAAAGAATTATTGCTACAAATGCAAAATGGAGATACAAGTGCTAGAGAGAAATTTATTAAGGGGAATCTGAGATTAGTGCTTAGTGTAATCCAAAGGTTTAAT
PROTEIN sequence
Length: 71
MRKGITSKGLISIMMINKVEICGVNTAKLPVLKEKEMKELLLQMQNGDTSAREKFIKGNLRLVLSVIQRFN