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NECEvent2014_8_4_Clostridium_perfringens_30_8

NECEvent2014_8_4_Clostridium_perfringens_30_11
In projects: NECEvent2014_8_4

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 451-500 of 810 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_4730 178_004_scaffold_4730
Species: Clostridium perfringens (100%)
1 1260 bp 34.52 18.10 93.57
NECEvent2014_8_4_scaffold_4747 178_004_scaffold_4747
Species: Clostridium perfringens (100%)
2 1256 bp 25.80 5.97 93.63
NECEvent2014_8_4_scaffold_1778 178_004_scaffold_1778
Species: Clostridium perfringens (100%)
4 3617 bp 29.36 6.55 93.64
NECEvent2014_8_4_scaffold_4935 178_004_scaffold_4935
Species: Clostridium perfringens (100%)
1 1198 bp 32.97 9.52 93.66
NECEvent2014_8_4_scaffold_2962 178_004_scaffold_2962
Species: Clostridium perfringens (66.67%)
3 2145 bp 31.70 9.23 93.71
NECEvent2014_8_4_scaffold_3058 178_004_scaffold_3058
Species: Clostridium perfringens (100%)
3 2064 bp 30.96 8.58 93.75
NECEvent2014_8_4_scaffold_2123 178_004_scaffold_2123
Species: Clostridium perfringens (100%)
4 3075 bp 30.99 13.27 93.76
NECEvent2014_8_4_scaffold_1928 178_004_scaffold_1928
Species: Clostridium perfringens (100%)
4 3378 bp 31.79 9.90 93.78
NECEvent2014_8_4_scaffold_2405 178_004_scaffold_2405
Species: Clostridium perfringens (66.67%)
3 2735 bp 31.77 8.56 93.78
NECEvent2014_8_4_scaffold_2523 178_004_scaffold_2523
Species: Clostridium perfringens (100%)
2 2599 bp 31.24 8.66 93.84
NECEvent2014_8_4_scaffold_3877 178_004_scaffold_3877
Species: Clostridium perfringens (100%)
1 1592 bp 27.39 3.86 93.84
NECEvent2014_8_4_scaffold_3734 178_004_scaffold_3734
Species: Clostridium perfringens (100%)
2 1662 bp 30.63 6.14 93.86
NECEvent2014_8_4_scaffold_3066 178_004_scaffold_3066
Species: Clostridium perfringens (100%)
3 2054 bp 27.90 5.84 93.91
NECEvent2014_8_4_scaffold_1740 178_004_scaffold_1740
Species: Clostridium perfringens (100%)
5 3688 bp 31.07 10.66 93.95
NECEvent2014_8_4_scaffold_4203 178_004_scaffold_4203
Species: Clostridium perfringens (100%)
1 1446 bp 29.74 8.61 93.98
NECEvent2014_8_4_scaffold_902 178_004_scaffold_902
Species: Clostridium perfringens (100%)
10 7206 bp 29.92 8.26 94.05
NECEvent2014_8_4_scaffold_5450 178_004_scaffold_5450
Species: Clostridium perfringens (100%)
1 1059 bp 31.35 5.38 94.05
NECEvent2014_8_4_scaffold_2125 178_004_scaffold_2125
Species: Clostridium perfringens (100%)
2 3074 bp 32.73 10.98 94.08
NECEvent2014_8_4_scaffold_2017 178_004_scaffold_2017
Species: Clostridium perfringens (100%)
1 3214 bp 31.99 8.87 94.09
NECEvent2014_8_4_scaffold_2332 178_004_scaffold_2332
Species: Clostridium perfringens (100%)
2 2824 bp 32.05 12.22 94.12
NECEvent2014_8_4_scaffold_2581 178_004_scaffold_2581
Species: Clostridium perfringens (100%)
4 2540 bp 25.43 4.61 94.13
NECEvent2014_8_4_scaffold_2108 178_004_scaffold_2108
Species: Clostridium perfringens (100%)
2 3097 bp 30.06 5.96 94.16
NECEvent2014_8_4_scaffold_3653 178_004_scaffold_3653
Species: Clostridium perfringens (100%)
2 1701 bp 30.22 6.53 94.18
NECEvent2014_8_4_scaffold_1411 178_004_scaffold_1411
Species: Clostridium perfringens (75%)
4 4464 bp 30.60 9.41 94.22
NECEvent2014_8_4_scaffold_4533 178_004_scaffold_4533
Species: Clostridium perfringens (100%)
1 1318 bp 28.45 10.70 94.23
NECEvent2014_8_4_scaffold_3779 178_004_scaffold_3779
Species: Clostridium perfringens (100%)
3 1636 bp 29.83 8.99 94.25
NECEvent2014_8_4_scaffold_863 178_004_scaffold_863
Species: Clostridium perfringens (100%)
6 7506 bp 30.92 9.27 94.28
NECEvent2014_8_4_scaffold_2745 178_004_scaffold_2745
Species: Clostridium perfringens (100%)
3 2364 bp 31.43 9.07 94.29
NECEvent2014_8_4_scaffold_3539 178_004_scaffold_3539
Species: Clostridium perfringens (100%)
2 1756 bp 31.72 8.54 94.31
NECEvent2014_8_4_scaffold_2570 178_004_scaffold_2570
Species: Clostridium perfringens (100%)
1 2548 bp 33.67 11.30 94.31
NECEvent2014_8_4_scaffold_1224 178_004_scaffold_1224
Species: Clostridium perfringens (100%)
2 5242 bp 30.48 9.10 94.32
NECEvent2014_8_4_scaffold_4053 178_004_scaffold_4053
Species: Clostridium perfringens (100%)
2 1517 bp 30.19 6.33 94.33
NECEvent2014_8_4_scaffold_1810 178_004_scaffold_1810
Species: Clostridium perfringens (100%)
2 3561 bp 32.32 14.74 94.36
NECEvent2014_8_4_scaffold_1426 178_004_scaffold_1426
Species: Clostridium perfringens (100%)
4 4428 bp 30.71 8.60 94.38
NECEvent2014_8_4_scaffold_3712 178_004_scaffold_3712
Species: Clostridium perfringens (100%)
2 1671 bp 30.16 7.99 94.43
NECEvent2014_8_4_scaffold_1485 178_004_scaffold_1485
Species: Clostridium perfringens (100%)
2 4244 bp 30.61 7.56 94.44
NECEvent2014_8_4_scaffold_3633 178_004_scaffold_3633
Species: Clostridium perfringens (100%)
2 1712 bp 26.46 3.68 94.45
NECEvent2014_8_4_scaffold_2035 178_004_scaffold_2035
Species: Clostridium perfringens (100%)
3 3192 bp 30.08 7.14 94.45
NECEvent2014_8_4_scaffold_1076 178_004_scaffold_1076
Species: Clostridium perfringens (100%)
4 5940 bp 31.55 9.60 94.49
NECEvent2014_8_4_scaffold_3927 178_004_scaffold_3927
Species: Clostridium perfringens (100%)
3 1565 bp 31.88 9.30 94.50
NECEvent2014_8_4_scaffold_1279 178_004_scaffold_1279
Species: Clostridium perfringens (100%)
5 4936 bp 32.62 12.64 94.51
NECEvent2014_8_4_scaffold_2368 178_004_scaffold_2368
Species: Clostridium perfringens (100%)
3 2782 bp 31.92 7.87 94.57
NECEvent2014_8_4_scaffold_2752 178_004_scaffold_2752
Species: Clostridium perfringens (100%)
3 2353 bp 29.41 6.12 94.60
NECEvent2014_8_4_scaffold_4599 178_004_scaffold_4599
Species: Clostridium perfringens (100%)
1 1297 bp 36.16 12.03 94.60
NECEvent2014_8_4_scaffold_1638 178_004_scaffold_1638
Species: Clostridium perfringens (100%)
3 3889 bp 30.44 6.02 94.65
NECEvent2014_8_4_scaffold_832 178_004_scaffold_832
Species: Clostridium perfringens (100%)
10 7815 bp 30.48 8.71 94.70
NECEvent2014_8_4_scaffold_5157 178_004_scaffold_5157
Species: Clostridium perfringens (100%)
2 1134 bp 30.07 5.56 94.71
NECEvent2014_8_4_scaffold_3891 178_004_scaffold_3891
Species: Clostridium perfringens (100%)
1 1583 bp 31.14 9.67 94.76
NECEvent2014_8_4_scaffold_2277 178_004_scaffold_2277
Species: Clostridium perfringens (100%)
5 2884 bp 31.48 11.81 94.76
NECEvent2014_8_4_scaffold_2065 178_004_scaffold_2065
Species: Clostridium perfringens (100%)
5 3149 bp 31.69 9.38 94.79
Displaying items 451-500 of 810 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.