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NECEvent2014_8_4_Clostridium_perfringens_30_8

NECEvent2014_8_4_Clostridium_perfringens_30_11
In projects: NECEvent2014_8_4

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 401-450 of 810 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_806 178_004_scaffold_806
Species: Clostridium perfringens (100%)
7 8072 bp 32.25 12.80 92.06
NECEvent2014_8_4_scaffold_2097 178_004_scaffold_2097
Species: Clostridium perfringens (100%)
3 3110 bp 31.32 11.43 92.12
NECEvent2014_8_4_scaffold_5092 178_004_scaffold_5092
Species: Clostridium perfringens (100%)
2 1155 bp 29.70 5.45 92.21
NECEvent2014_8_4_scaffold_4699 178_004_scaffold_4699
Species: Clostridium perfringens (100%)
1 1268 bp 31.23 6.15 92.27
NECEvent2014_8_4_scaffold_5670 178_004_scaffold_5670
Species: Clostridium perfringens (100%)
1 1010 bp 30.30 8.32 92.38
NECEvent2014_8_4_scaffold_4066 178_004_scaffold_4066
Species: Clostridium perfringens (100%)
2 1510 bp 29.60 6.36 92.38
NECEvent2014_8_4_scaffold_2813 178_004_scaffold_2813
Species: Clostridium perfringens (100%)
2 2289 bp 27.26 4.46 92.40
NECEvent2014_8_4_scaffold_3645 178_004_scaffold_3645
Species: Clostridium perfringens (100%)
1 1704 bp 30.81 14.79 92.43
NECEvent2014_8_4_scaffold_1837 178_004_scaffold_1837
Species: Clostridium perfringens (100%)
2 3528 bp 33.13 13.39 92.43
NECEvent2014_8_4_scaffold_2499 178_004_scaffold_2499
Species: Clostridium perfringens (100%)
3 2625 bp 32.27 14.00 92.46
NECEvent2014_8_4_scaffold_2694 178_004_scaffold_2694
Species: Clostridium perfringens (100%)
2 2427 bp 30.08 8.22 92.46
NECEvent2014_8_4_scaffold_4809 178_004_scaffold_4809
Species: Clostridium perfringens (100%)
3 1236 bp 27.59 4.98 92.48
NECEvent2014_8_4_scaffold_1453 178_004_scaffold_1453
Species: Clostridium perfringens (100%)
3 4311 bp 30.87 7.72 92.48
NECEvent2014_8_4_scaffold_4100 178_004_scaffold_4100
Species: Clostridium perfringens (100%)
2 1492 bp 29.56 3.92 92.49
NECEvent2014_8_4_scaffold_4803 178_004_scaffold_4803
Species: Clostridium perfringens (100%)
1 1239 bp 28.57 6.54 92.49
NECEvent2014_8_4_scaffold_1621 178_004_scaffold_1621
Species: Clostridium perfringens (100%)
2 3931 bp 31.87 9.31 92.50
NECEvent2014_8_4_scaffold_2040 178_004_scaffold_2040
Species: Clostridium perfringens (100%)
2 3184 bp 31.25 8.39 92.53
NECEvent2014_8_4_scaffold_2805 178_004_scaffold_2805
Species: Clostridium perfringens (100%)
1 2308 bp 30.55 8.38 92.55
NECEvent2014_8_4_scaffold_4161 178_004_scaffold_4161
Species: Clostridium perfringens (100%)
2 1465 bp 29.56 7.17 92.56
NECEvent2014_8_4_scaffold_4398 178_004_scaffold_4398
Species: Clostridium perfringens (100%)
1 1371 bp 31.22 9.63 92.56
NECEvent2014_8_4_scaffold_3068 178_004_scaffold_3068
Species: Clostridium perfringens (100%)
2 2053 bp 30.05 5.99 92.64
NECEvent2014_8_4_scaffold_4685 178_004_scaffold_4685
Species: Clostridium perfringens (100%)
2 1271 bp 26.67 6.37 92.76
NECEvent2014_8_4_scaffold_3792 178_004_scaffold_3792
Species: Clostridium perfringens (100%)
1 1629 bp 29.90 9.21 92.82
NECEvent2014_8_4_scaffold_4263 178_004_scaffold_4263
Species: Clostridium perfringens (100%)
1 1422 bp 30.17 6.54 92.83
NECEvent2014_8_4_scaffold_3053 178_004_scaffold_3053
Species: Clostridium perfringens (100%)
3 2068 bp 29.40 7.11 92.84
NECEvent2014_8_4_scaffold_5422 178_004_scaffold_5422
Species: Clostridium perfringens (50%)
2 1066 bp 30.02 13.23 92.87
NECEvent2014_8_4_scaffold_3035 178_004_scaffold_3035
Species: Clostridium perfringens (100%)
2 2077 bp 29.42 8.67 92.87
NECEvent2014_8_4_scaffold_2590 178_004_scaffold_2590
Species: Clostridium perfringens (50%)
2 2532 bp 31.12 10.31 92.89
NECEvent2014_8_4_scaffold_5222 178_004_scaffold_5222
Species: Clostridium perfringens (100%)
1 1117 bp 34.11 11.95 92.93
NECEvent2014_8_4_scaffold_4808 178_004_scaffold_4808
Species: Clostridium perfringens (100%)
1 1236 bp 32.61 11.41 92.96
NECEvent2014_8_4_scaffold_1724 178_004_scaffold_1724
Species: Clostridium perfringens (100%)
3 3724 bp 33.27 14.54 93.05
NECEvent2014_8_4_scaffold_3157 178_004_scaffold_3157
Species: Clostridium perfringens (100%)
2 1986 bp 29.36 7.10 93.05
NECEvent2014_8_4_scaffold_4215 178_004_scaffold_4215
Species: Clostridium perfringens (100%)
1 1441 bp 27.20 7.08 93.06
NECEvent2014_8_4_scaffold_5306 178_004_scaffold_5306
Species: Clostridium perfringens (100%)
1 1094 bp 31.08 4.66 93.24
NECEvent2014_8_4_scaffold_2946 178_004_scaffold_2946
Species: Clostridium perfringens (100%)
1 2159 bp 31.31 9.17 93.24
NECEvent2014_8_4_scaffold_3008 178_004_scaffold_3008
Species: Clostridium perfringens (100%)
2 2104 bp 31.56 8.98 93.25
NECEvent2014_8_4_scaffold_1523 178_004_scaffold_1523
Species: Clostridium perfringens (100%)
2 4158 bp 30.83 6.85 93.29
NECEvent2014_8_4_scaffold_5269 178_004_scaffold_5269
Species: Clostridium perfringens (100%)
1 1106 bp 29.20 7.05 93.31
NECEvent2014_8_4_scaffold_4346 178_004_scaffold_4346
Species: Clostridium perfringens (100%)
1 1392 bp 30.10 8.41 93.32
NECEvent2014_8_4_scaffold_3644 178_004_scaffold_3644
Species: Clostridium perfringens (100%)
2 1707 bp 28.35 5.80 93.32
NECEvent2014_8_4_scaffold_2544 178_004_scaffold_2544
Species: Clostridium perfringens (100%)
3 2578 bp 31.46 9.43 93.33
NECEvent2014_8_4_scaffold_4030 178_004_scaffold_4030
Species: Clostridium perfringens (100%)
2 1526 bp 28.31 8.06 93.38
NECEvent2014_8_4_scaffold_4503 178_004_scaffold_4503
Species: Clostridium perfringens (100%)
2 1330 bp 28.42 4.96 93.38
NECEvent2014_8_4_scaffold_1283 178_004_scaffold_1283
Species: Clostridium perfringens (100%)
6 4924 bp 25.85 8.90 93.40
NECEvent2014_8_4_scaffold_5136 178_004_scaffold_5136
Species: Clostridium perfringens (100%)
2 1140 bp 30.96 6.97 93.42
NECEvent2014_8_4_scaffold_3291 178_004_scaffold_3291
Species: Clostridium perfringens (100%)
4 1900 bp 28.11 6.32 93.47
NECEvent2014_8_4_scaffold_1414 178_004_scaffold_1414
Species: Clostridium perfringens (100%)
2 4451 bp 32.58 13.72 93.48
NECEvent2014_8_4_scaffold_5599 178_004_scaffold_5599
Species: Clostridium perfringens (100%)
1 1030 bp 30.68 6.99 93.50
NECEvent2014_8_4_scaffold_1617 178_004_scaffold_1617
Species: Clostridium perfringens (100%)
4 3940 bp 31.27 9.21 93.50
NECEvent2014_8_4_scaffold_3372 178_004_scaffold_3372
Species: Clostridium perfringens (100%)
2 1848 bp 31.06 10.39 93.51
Displaying items 401-450 of 810 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.