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NECEvent2014_8_4_Clostridium_perfringens_30_8

NECEvent2014_8_4_Clostridium_perfringens_30_11
In projects: NECEvent2014_8_4

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 551-600 of 810 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2384 178_004_scaffold_2384
Species: Clostridium perfringens (100%)
1 2753 bp 31.06 11.01 91.65
NECEvent2014_8_4_scaffold_3920 178_004_scaffold_3920
Species: Clostridium perfringens (100%)
1 1569 bp 34.23 13.77 100.00
NECEvent2014_8_4_scaffold_5712 178_004_scaffold_5712
Species: Clostridium perfringens (100%)
1 1001 bp 29.57 4.20 99.80
NECEvent2014_8_4_scaffold_5201 178_004_scaffold_5201
Species: Clostridium perfringens (100%)
1 1123 bp 26.18 4.54 77.74
NECEvent2014_8_4_scaffold_2643 178_004_scaffold_2643
Species: Clostridium perfringens (100%)
1 2474 bp 30.60 7.40 98.83
NECEvent2014_8_4_scaffold_4181 178_004_scaffold_4181
Species: Clostridium perfringens (100%)
1 1455 bp 30.72 9.07 98.76
NECEvent2014_8_4_scaffold_3414 178_004_scaffold_3414
Species: Clostridium perfringens (100%)
1 1827 bp 31.58 9.36 81.61
NECEvent2014_8_4_scaffold_3671 178_004_scaffold_3671
Species: Clostridium perfringens (100%)
1 1693 bp 33.31 13.38 83.99
NECEvent2014_8_4_scaffold_2138 178_004_scaffold_2138
Species: Clostridium perfringens (100%)
1 3064 bp 28.39 8.03 99.87
NECEvent2014_8_4_scaffold_4699 178_004_scaffold_4699
Species: Clostridium perfringens (100%)
1 1268 bp 31.23 6.15 92.27
NECEvent2014_8_4_scaffold_5212 178_004_scaffold_5212
Species: Clostridium perfringens (100%)
1 1121 bp 31.13 6.42 95.81
NECEvent2014_8_4_scaffold_3423 178_004_scaffold_3423
Species: Clostridium perfringens (100%)
1 1821 bp 27.84 6.59 96.87
NECEvent2014_8_4_scaffold_3936 178_004_scaffold_3936
Species: Clostridium perfringens (100%)
1 1562 bp 31.82 9.60 85.85
NECEvent2014_8_4_scaffold_4704 178_004_scaffold_4704
Species: Clostridium perfringens (100%)
1 1267 bp 25.49 7.58 68.67
NECEvent2014_8_4_scaffold_4450 178_004_scaffold_4450
Species: Clostridium perfringens (100%)
1 1350 bp 29.48 5.56 96.00
NECEvent2014_8_4_scaffold_3683 178_004_scaffold_3683
Species: Clostridium perfringens (100%)
1 1688 bp 27.84 7.11 85.13
NECEvent2014_8_4_scaffold_4453 178_004_scaffold_4453
Species: Clostridium perfringens (100%)
1 1349 bp 28.32 7.67 70.72
NECEvent2014_8_4_scaffold_2150 178_004_scaffold_2150
Species: Clostridium perfringens (100%)
1 3045 bp 31.63 8.37 98.03
NECEvent2014_8_4_scaffold_5222 178_004_scaffold_5222
Species: Clostridium perfringens (100%)
1 1117 bp 34.11 11.95 92.93
NECEvent2014_8_4_scaffold_4967 178_004_scaffold_4967
Species: Clostridium perfringens (100%)
1 1189 bp 25.23 5.30 89.32
NECEvent2014_8_4_scaffold_5223 178_004_scaffold_5223
Species: Clostridium perfringens (100%)
1 1117 bp 27.22 4.30 65.80
NECEvent2014_8_4_scaffold_5224 178_004_scaffold_5224
Species: Clostridium perfringens (100%)
1 1117 bp 28.74 6.98 69.83
NECEvent2014_8_4_scaffold_2153 178_004_scaffold_2153
Species: Clostridium perfringens (100%)
1 3040 bp 30.46 7.11 95.13
NECEvent2014_8_4_scaffold_2665 178_004_scaffold_2665
Species: Clostridium perfringens (100%)
1 2457 bp 28.82 5.98 95.12
NECEvent2014_8_4_scaffold_4970 178_004_scaffold_4970
Species: Clostridium perfringens (100%)
1 1189 bp 30.03 8.58 99.41
NECEvent2014_8_4_scaffold_2923 178_004_scaffold_2923
Species: Clostridium perfringens (100%)
1 2186 bp 29.55 6.45 87.15
NECEvent2014_8_4_scaffold_4203 178_004_scaffold_4203
Species: Clostridium perfringens (100%)
1 1446 bp 29.74 8.61 93.98
NECEvent2014_8_4_scaffold_5227 178_004_scaffold_5227
Species: Clostridium perfringens (100%)
1 1117 bp 28.02 5.91 97.22
NECEvent2014_8_4_scaffold_3694 178_004_scaffold_3694
Species: Clostridium perfringens (100%)
1 1682 bp 32.64 5.80 96.31
NECEvent2014_8_4_scaffold_1903 178_004_scaffold_1903
Species: Clostridium perfringens (100%)
1 3404 bp 33.20 13.75 99.32
NECEvent2014_8_4_scaffold_4463 178_004_scaffold_4463
Species: Clostridium perfringens (100%)
1 1347 bp 35.26 7.57 79.06
NECEvent2014_8_4_scaffold_4976 178_004_scaffold_4976
Species: Clostridium perfringens (100%)
1 1187 bp 30.75 6.82 99.83
NECEvent2014_8_4_scaffold_4977 178_004_scaffold_4977
Species: Clostridium perfringens (100%)
1 1187 bp 30.41 11.63 72.79
NECEvent2014_8_4_scaffold_3186 178_004_scaffold_3186
Species: Clostridium perfringens (100%)
1 1970 bp 27.46 5.94 94.87
NECEvent2014_8_4_scaffold_4722 178_004_scaffold_4722
Species: Clostridium perfringens (100%)
1 1262 bp 30.74 6.18 99.84
NECEvent2014_8_4_scaffold_4978 178_004_scaffold_4978
Species: Clostridium perfringens (100%)
1 1187 bp 29.06 5.18 82.14
NECEvent2014_8_4_scaffold_5235 178_004_scaffold_5235
Species: Clostridium perfringens (100%)
1 1115 bp 27.17 4.84 80.99
NECEvent2014_8_4_scaffold_4213 178_004_scaffold_4213
Species: Clostridium perfringens (100%)
1 1441 bp 31.99 9.99 87.86
NECEvent2014_8_4_scaffold_3958 178_004_scaffold_3958
Species: Clostridium perfringens (100%)
1 1553 bp 31.49 11.01 75.72
NECEvent2014_8_4_scaffold_3703 178_004_scaffold_3703
Species: Clostridium perfringens (100%)
1 1676 bp 30.19 8.95 97.37
NECEvent2014_8_4_scaffold_4215 178_004_scaffold_4215
Species: Clostridium perfringens (100%)
1 1441 bp 27.20 7.08 93.06
NECEvent2014_8_4_scaffold_4985 178_004_scaffold_4985
Species: Clostridium perfringens (100%)
1 1185 bp 32.41 10.89 99.75
NECEvent2014_8_4_scaffold_5497 178_004_scaffold_5497
Species: Clostridium perfringens (100%)
1 1050 bp 34.76 18.57 90.29
NECEvent2014_8_4_scaffold_4730 178_004_scaffold_4730
Species: Clostridium perfringens (100%)
1 1260 bp 34.52 18.10 93.57
NECEvent2014_8_4_scaffold_4986 178_004_scaffold_4986
Species: Clostridium perfringens (100%)
1 1185 bp 29.54 8.61 77.22
NECEvent2014_8_4_scaffold_5244 178_004_scaffold_5244
Species: Clostridium perfringens (100%)
1 1113 bp 32.79 7.55 99.73
NECEvent2014_8_4_scaffold_4221 178_004_scaffold_4221
Species: Clostridium perfringens (100%)
1 1438 bp 33.59 8.14 98.89
NECEvent2014_8_4_scaffold_5501 178_004_scaffold_5501
Species: Clostridium perfringens (100%)
1 1050 bp 33.43 8.86 95.71
NECEvent2014_8_4_scaffold_4478 178_004_scaffold_4478
Species: Clostridium perfringens (100%)
1 1339 bp 32.41 13.44 91.19
NECEvent2014_8_4_scaffold_5505 178_004_scaffold_5505
Species: Clostridium perfringens (100%)
1 1048 bp 29.58 8.59 99.90
Displaying items 551-600 of 810 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.