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NECEvent2014_8_4_Clostridium_perfringens_30_8

NECEvent2014_8_4_Clostridium_perfringens_30_11
In projects: NECEvent2014_8_4

Consensus taxonomy: Clostridium perfringens  →  Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 601-650 of 810 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_4_scaffold_2946 178_004_scaffold_2946
Species: Clostridium perfringens (100%)
1 2159 bp 31.31 9.17 93.24
NECEvent2014_8_4_scaffold_2947 178_004_scaffold_2947
Species: Clostridium perfringens (100%)
1 2158 bp 30.82 8.62 87.30
NECEvent2014_8_4_scaffold_3203 178_004_scaffold_3203
Species: Clostridium perfringens (100%)
1 1960 bp 28.52 4.90 97.65
NECEvent2014_8_4_scaffold_4739 178_004_scaffold_4739
Species: Clostridium perfringens (100%)
1 1258 bp 29.73 7.99 88.71
NECEvent2014_8_4_scaffold_2948 178_004_scaffold_2948
Species: Clostridium perfringens (100%)
1 2157 bp 27.86 4.59 99.86
NECEvent2014_8_4_scaffold_5252 178_004_scaffold_5252
Species: Clostridium perfringens (100%)
1 1110 bp 27.48 5.95 74.59
NECEvent2014_8_4_scaffold_3719 178_004_scaffold_3719
Species: Clostridium perfringens (100%)
1 1669 bp 28.76 7.01 99.94
NECEvent2014_8_4_scaffold_5255 178_004_scaffold_5255
Species: Clostridium perfringens (100%)
1 1110 bp 29.01 12.84 76.22
NECEvent2014_8_4_scaffold_5512 178_004_scaffold_5512
Species: Clostridium perfringens (100%)
1 1048 bp 30.63 8.87 91.89
NECEvent2014_8_4_scaffold_5257 178_004_scaffold_5257
Species: Clostridium perfringens (100%)
1 1110 bp 28.65 7.30 99.73
NECEvent2014_8_4_scaffold_5259 178_004_scaffold_5259
Species: Clostridium perfringens (100%)
1 1109 bp 27.41 4.73 84.94
NECEvent2014_8_4_scaffold_3212 178_004_scaffold_3212
Species: Clostridium perfringens (100%)
1 1954 bp 31.37 15.35 79.68
NECEvent2014_8_4_scaffold_5260 178_004_scaffold_5260
Species: Clostridium perfringens (100%)
1 1109 bp 29.58 8.12 87.65
NECEvent2014_8_4_scaffold_3982 178_004_scaffold_3982
Species: Clostridium perfringens (100%)
1 1542 bp 35.67 20.04 91.05
NECEvent2014_8_4_scaffold_4751 178_004_scaffold_4751
Species: Clostridium perfringens (100%)
1 1254 bp 27.19 5.38 100.00
NECEvent2014_8_4_scaffold_5519 178_004_scaffold_5519
Species: Clostridium perfringens (100%)
1 1046 bp 28.87 5.45 61.66
NECEvent2014_8_4_scaffold_3216 178_004_scaffold_3216
Species: Clostridium perfringens (100%)
1 1952 bp 29.15 8.45 80.38
NECEvent2014_8_4_scaffold_5009 178_004_scaffold_5009
Species: Clostridium perfringens (100%)
1 1179 bp 28.07 5.60 77.86
NECEvent2014_8_4_scaffold_3986 178_004_scaffold_3986
Species: Clostridium perfringens (100%)
1 1541 bp 27.19 4.67 88.58
NECEvent2014_8_4_scaffold_5266 178_004_scaffold_5266
Species: Clostridium perfringens (100%)
1 1107 bp 30.17 7.86 100.00
NECEvent2014_8_4_scaffold_3732 178_004_scaffold_3732
Species: Clostridium perfringens (100%)
1 1664 bp 33.53 11.90 99.88
NECEvent2014_8_4_scaffold_5012 178_004_scaffold_5012
Species: Clostridium perfringens (100%)
1 1179 bp 29.43 6.87 97.46
NECEvent2014_8_4_scaffold_5269 178_004_scaffold_5269
Species: Clostridium perfringens (100%)
1 1106 bp 29.20 7.05 93.31
NECEvent2014_8_4_scaffold_5525 178_004_scaffold_5525
Species: Clostridium perfringens (100%)
1 1044 bp 29.50 5.60 97.70
NECEvent2014_8_4_scaffold_3990 178_004_scaffold_3990
Species: Clostridium perfringens (100%)
1 1539 bp 31.51 10.14 84.60
NECEvent2014_8_4_scaffold_4759 178_004_scaffold_4759
Species: Clostridium perfringens (100%)
1 1252 bp 31.63 5.99 98.00
NECEvent2014_8_4_scaffold_5271 178_004_scaffold_5271
Species: Clostridium perfringens (100%)
1 1106 bp 32.01 8.41 94.94
NECEvent2014_8_4_scaffold_2712 178_004_scaffold_2712
Species: Clostridium perfringens (100%)
1 2402 bp 30.27 10.18 96.92
NECEvent2014_8_4_scaffold_5016 178_004_scaffold_5016
Species: Clostridium perfringens (100%)
1 1177 bp 24.30 3.31 68.56
NECEvent2014_8_4_scaffold_2969 178_004_scaffold_2969
Species: Clostridium perfringens (100%)
1 2136 bp 28.51 6.95 98.46
NECEvent2014_8_4_scaffold_5017 178_004_scaffold_5017
Species: Clostridium perfringens (100%)
1 1176 bp 30.10 10.97 85.97
NECEvent2014_8_4_scaffold_4506 178_004_scaffold_4506
Species: Clostridium perfringens (100%)
1 1328 bp 28.61 4.74 99.85
NECEvent2014_8_4_scaffold_3995 178_004_scaffold_3995
Species: Clostridium perfringens (100%)
1 1538 bp 30.62 10.73 90.70
NECEvent2014_8_4_scaffold_4507 178_004_scaffold_4507
Species: Clostridium perfringens (100%)
1 1328 bp 29.37 7.57 88.55
NECEvent2014_8_4_scaffold_5531 178_004_scaffold_5531
Species: Clostridium botulinum (100%)
1 1043 bp 30.39 7.77 99.81
NECEvent2014_8_4_scaffold_5021 178_004_scaffold_5021
Species: Clostridium perfringens (100%)
1 1175 bp 31.32 9.96 96.00
NECEvent2014_8_4_scaffold_5277 178_004_scaffold_5277
Species: Clostridium perfringens (100%)
1 1103 bp 28.47 5.71 90.30
NECEvent2014_8_4_scaffold_3486 178_004_scaffold_3486
Species: Clostridium perfringens (100%)
1 1778 bp 29.58 9.28 76.94
NECEvent2014_8_4_scaffold_5534 178_004_scaffold_5534
Species: Clostridium perfringens (100%)
1 1042 bp 31.00 6.33 99.90
NECEvent2014_8_4_scaffold_5023 178_004_scaffold_5023
Species: Clostridium perfringens (100%)
1 1174 bp 28.53 3.83 96.85
NECEvent2014_8_4_scaffold_4256 178_004_scaffold_4256
Species: Clostridium perfringens (100%)
1 1425 bp 29.61 6.74 89.89
NECEvent2014_8_4_scaffold_5024 178_004_scaffold_5024
Species: Clostridium perfringens (100%)
1 1174 bp 31.18 8.18 97.36
NECEvent2014_8_4_scaffold_2977 178_004_scaffold_2977
Species: Clostridium perfringens (100%)
1 2129 bp 32.60 16.91 91.31
NECEvent2014_8_4_scaffold_5282 178_004_scaffold_5282
Species: Clostridium perfringens (100%)
1 1101 bp 30.15 5.72 83.11
NECEvent2014_8_4_scaffold_5538 178_004_scaffold_5538
Species: Clostridium perfringens (100%)
1 1041 bp 29.59 8.65 72.91
NECEvent2014_8_4_scaffold_2980 178_004_scaffold_2980
Species: Clostridium perfringens (100%)
1 2127 bp 26.42 5.64 86.74
NECEvent2014_8_4_scaffold_4772 178_004_scaffold_4772
Species: Clostridium perfringens (100%)
1 1248 bp 30.77 7.93 96.15
NECEvent2014_8_4_scaffold_5028 178_004_scaffold_5028
Species: Clostridium perfringens (100%)
1 1173 bp 30.26 4.60 96.93
NECEvent2014_8_4_scaffold_2725 178_004_scaffold_2725
Species: Clostridium perfringens (100%)
1 2382 bp 29.22 6.11 78.84
NECEvent2014_8_4_scaffold_3493 178_004_scaffold_3493
Species: Clostridium perfringens (100%)
1 1775 bp 31.66 8.79 99.89
Displaying items 601-650 of 810 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.