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NECEvent2014_8_4_scaffold_0

Alias: 178_004_scaffold_0

Search features with annotation key words

Displaying items 61-90 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_0_60
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70756..72129
DNA (1374bp) protein (458aa)
MATE efflux family protein n=2 Tax=Turicibacter RepID=D4W515_9FIRM rbh
Multidrug transporter MatE {ECO:0000313|EMBL:KJU71914.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
MATE efflux family protein
NECEvent2014_8_4_scaffold_0_61
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(72217..72402)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WBL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ00411.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_62
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

72514..73089
DNA (576bp) protein (192aa)
Putative spore maturation protein A n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK39_9CLOT
Putative spore maturation protein A {ECO:0000313|EMBL:EKY27947.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
spmA; spore maturation protein A
NECEvent2014_8_4_scaffold_0_63
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73102..73626
DNA (525bp) protein (175aa)
Spore maturation protein B n=1 Tax=Clostridium sp. CAG:221 RepID=R6G3M2_9CLOT
Spore maturation protein B {ECO:0000313|EMBL:CDB16064.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostrid
hypothetical protein
NECEvent2014_8_4_scaffold_0_64
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73683..74408
DNA (726bp) protein (242aa)
ABC-type transporter ATP-binding protein EcsA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRQ7_CLOSA rbh
ecsA; ABC-type transporter ATP-binding protein EcsA rbh
ABC-type transporter ATP-binding protein EcsA {ECO:0000313|EMBL:AGX43203.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
NECEvent2014_8_4_scaffold_0_65
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

74401..76032
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MNL7_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56311.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_8_4_scaffold_0_66
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

76108..77376
DNA (1269bp) protein (423aa)
Peptidase M24 n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBZ2_9CLOT rbh
Peptidase M24 {ECO:0000313|EMBL:KJU72001.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_67
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77437..77763
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MKS9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41143.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_4_scaffold_0_68
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

77830..79452
DNA (1623bp) protein (541aa)
ABC1 family protein kinase n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UXB7_CLOBA rbh
ABC1 family protein kinase
Protein kinase {ECO:0000313|EMBL:KIL08423.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_4_scaffold_0_69
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

79811..81532
DNA (1722bp) protein (574aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK34_9CLOT rbh
na+/H+ antiporter family protein
Na+/H+ antiporter family protein {ECO:0000313|EMBL:AIY84867.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
NECEvent2014_8_4_scaffold_0_70
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81645..82100)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HID0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99405.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_71
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82198..82695)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXQ8_9CLOT
fusaric acid resistance family protein
Fusaric acid resistance family protein {ECO:0000313|EMBL:AIY84683.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_8_4_scaffold_0_72
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


83147..85078
DNA (1932bp) protein (644aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
metG; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENN3_9CLOT rbh
NECEvent2014_8_4_scaffold_0_73
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

85231..86859
DNA (1629bp) protein (543aa)
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN78_CLOSA
Suspect SCG annotation. See neighboring gene [NECEvent2014_8_4_scaffold_0_72].
NECEvent2014_8_4_scaffold_0_74
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87346..87789
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY22122.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_75
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

87915..88712
DNA (798bp) protein (266aa)
Hydrolase, TatD family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAW5_9CLOT
Hydrolase, TatD family {ECO:0000313|EMBL:EKQ56019.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26
TatD family hydrolase
NECEvent2014_8_4_scaffold_0_76
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

88956..90002
DNA (1047bp) protein (349aa)
3D/G5 domain protein n=2 Tax=Clostridium botulinum B RepID=B2THX3_CLOBB
3D domain protein {ECO:0000313|EMBL:AIY80696.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
3D/G5 domain protein
NECEvent2014_8_4_scaffold_0_77
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

90093..90659
DNA (567bp) protein (189aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=1 Tax=Clostridium colicanis 209318 RepID=N9WBK4_9CLOT
putative primase-like protein
NECEvent2014_8_4_scaffold_0_78
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


90663..91511
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LPG9_CLOB8
ksgA; dimethyladenosine transferase
NECEvent2014_8_4_scaffold_0_79
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

91630..92937
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THX6_CLOBB
Uncharacterized protein {ECO:0000313|EMBL:KJU71939.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_80
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

92973..93521
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNY8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41152.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_4_scaffold_0_81
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93619..94389
DNA (771bp) protein (257aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=632245
lgt2; prolipoprotein diacylglyceryl transferase 2 (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=3 Tax=Clostridium butyricum RepID=B1R1W5_CLOBU
NECEvent2014_8_4_scaffold_0_82
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94376..95209
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U530_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83865.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_8_4_scaffold_0_83
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

95235..96071
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XXQ1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ00392.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
cobQ/CobB/MinD/ParA nucleotide binding domain protein
NECEvent2014_8_4_scaffold_0_84
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

96141..96332
DNA (192bp) protein (64aa)
Ferredoxin n=212 Tax=Clostridium difficile RepID=T3H5X5_CLODC
ferredoxin
Ferredoxin {ECO:0000313|EMBL:EQI00012.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
NECEvent2014_8_4_scaffold_0_85
unknown

Not on your lists

comp(96511..96708)
DNA (198bp) protein (66aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_0_86
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(96772..97224)
DNA (453bp) protein (151aa)
Putative Transcriptional regulator, PadR family n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENP8_9CLOT
Putative Transcriptional regulator, PadR family {ECO:0000313|EMBL:CDG02802.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
PadR family transcriptional regulator
NECEvent2014_8_4_scaffold_0_87
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97229..98074)
DNA (846bp) protein (282aa)
EDD domain protein, DegV family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QIZ0_9CLOT rbh
EDD, DegV family domain protein
EDD, DegV family domain protein {ECO:0000313|EMBL:AIY83087.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. S
NECEvent2014_8_4_scaffold_0_88
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

98260..99300
DNA (1041bp) protein (347aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EKE9_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI95147.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
diguanylate cyclase
NECEvent2014_8_4_scaffold_0_89
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99333..100319)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPV7_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82682.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
Displaying items 61-90 of 115 in total

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