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NECEvent2014_8_4_scaffold_0

Alias: 178_004_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_0_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..526)
DNA (525bp) protein (175aa)
yciB; putative L,D-transpeptidase YciB (EC:2.-.-.-)
Putative L,D-transpeptidase YciB n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MJW5_CLOSA
Putative L,D-transpeptidase {ECO:0000313|EMBL:AGF53860.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylace
NECEvent2014_8_4_scaffold_0_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

674..1477
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2THD0_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD23390.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklun
NECEvent2014_8_4_scaffold_0_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1544..2749
DNA (1206bp) protein (402aa)
Exonuclease SbcCD, D subunit n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CNF3_CLOSO rbh
DNA repair exonuclease {ECO:0000313|EMBL:KJU71848.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
sbcD; exonuclease SbcCD, D subunit
NECEvent2014_8_4_scaffold_0_4
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2771..5872
DNA (3102bp) protein (1034aa)
Exonuclease SbcC {ECO:0000313|EMBL:CEN90147.1}; EC=3.1.11.- {ECO:0000313|EMBL:CEN90147.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
AAA domain protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VPH5_CLOBI rbh
AAA domain protein
NECEvent2014_8_4_scaffold_0_5
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6032..6871
DNA (840bp) protein (280aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
resE1; sensor histidine kinase ResE (EC:2.7.13.3)
Histidine kinase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TL63_9CLOT
NECEvent2014_8_4_scaffold_0_trna_1
unknown

Not on your lists

6943..7014
DNA (72bp)
transferRNA
NECEvent2014_8_4_scaffold_0_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7180..8322
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FPP8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDG02724.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8319..9215)
DNA (897bp) protein (299aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00663, ECO:0000256|SAAS:SAAS00093350};; TaxID=457396
psd; phosphatidylserine decarboxylase proenzyme Psd (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q377_9CLOT rbh
NECEvent2014_8_4_scaffold_0_8
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9547..11295
DNA (1749bp) protein (583aa)
iron hydrogenase 1 (EC:1.12.7.2)
Hydrogenase n=1 Tax=Clostridium paraputrificum RepID=Q6F4C7_9CLOT rbh
Hydrogenase {ECO:0000313|EMBL:BAD29951.1}; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium paraputrificum.;"
NECEvent2014_8_4_scaffold_0_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11355..11558
DNA (204bp) protein (68aa)
Heavy metal-associated domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKB1_9CLOT
heavy-metal-associated domain protein
Heavy-metal-associated domain protein {ECO:0000313|EMBL:AIY83644.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_8_4_scaffold_0_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11745..13340)
DNA (1596bp) protein (532aa)
Heme ABC transporter ATP-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FUL3_CLOPA
ABC transporter related {ECO:0000313|EMBL:AJG96716.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium
ABC transporter related protein
NECEvent2014_8_4_scaffold_0_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13533..14003
DNA (471bp) protein (157aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrepto
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000361B108
aminoacyl-tRNA editing domain protein
NECEvent2014_8_4_scaffold_0_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14100..14747)
DNA (648bp) protein (216aa)
Hemolysin-3 n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVA8_CLOBO rbh
Hemolysin-3 {ECO:0000313|EMBL:EES48376.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;
hemolysin-3
NECEvent2014_8_4_scaffold_0_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14962..15546
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2UX72_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES49926.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_8_4_scaffold_0_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15547..17247
DNA (1701bp) protein (567aa)
isopentenyl-diphosphate delta-isomerase n=1 Tax=Clostridium botulinum RepID=UPI00031A321A rbh
isopentenyl-diphosphate delta-isomerase
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:KIL08381.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_8_4_scaffold_0_15
unknown

Not on your lists

17266..17751
DNA (486bp) protein (162aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_0_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17784..19127)
DNA (1344bp) protein (448aa)
Membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVA3_CLOBO rbh
Membrane protein {ECO:0000313|EMBL:EES48456.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Belu
membrane protein
NECEvent2014_8_4_scaffold_0_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19329..20210
DNA (882bp) protein (294aa)
Hydrolase, Cof family n=2 Tax=Clostridium botulinum E RepID=B2UYQ1_CLOBA
hydrolase, Cof family
Haloacid dehalogenase {ECO:0000313|EMBL:KIL07986.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_8_4_scaffold_0_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20320..21162
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MNV9_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42208.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_8_4_scaffold_0_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21299..22711
DNA (1413bp) protein (471aa)
6-phospho-beta-glucosidase n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FRP3_CLOPA rbh
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KJU71588.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
glycoside hydrolase family protein
NECEvent2014_8_4_scaffold_0_20
unknown

Not on your lists

comp(23267..23362)
DNA (96bp) protein (32aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_0_21
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23433..24509
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EU14_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84586.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_8_4_scaffold_0_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24551..25360
DNA (810bp) protein (270aa)
proB; gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
gamma-glutamyl kinase n=1 Tax=Clostridium botulinum RepID=UPI00037F2840 rbh
NECEvent2014_8_4_scaffold_0_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25377..26621
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVA0_CLOBO rbh
NECEvent2014_8_4_scaffold_0_24
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26708..27151
DNA (444bp) protein (148aa)
GNAT family acetyltransferase n=1 Tax=Clostridium botulinum RepID=UPI0002F5EAA3
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ACD22960.1}; Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:CDH89045.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
NECEvent2014_8_4_scaffold_0_25
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27258..28091
DNA (834bp) protein (278aa)
DNA-binding protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287EC13 rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR25044.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_8_4_scaffold_0_26
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28250..28909
DNA (660bp) protein (220aa)
2,3-diketo-5-methylthio-1-phosphopentane phosphatase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJB0_CELLD rbh
2,3-diketo-5-methylthio-1-phosphopentane phosphatase
2,3-diketo-5-methylthio-1-phosphopentane phosphatase {ECO:0000313|EMBL:ADZ84403.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="
NECEvent2014_8_4_scaffold_0_27
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28909..29970
DNA (1062bp) protein (354aa)
glycerol-1-phosphate dehydrogenase (EC:1.1.1.261)
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) {ECO:0000313|EMBL:ADZ84404.1}; EC=1.1.1.261 {ECO:0000313|EMBL:ADZ84404.1};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachno
Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JJB1_CELLD rbh
NECEvent2014_8_4_scaffold_0_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30138..30365
DNA (228bp) protein (76aa)
Ferrous iron transport protein A n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1RCX8_CLOPF
Ferrous iron transport protein A {ECO:0000313|EMBL:EDT28105.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CP
feoA domain protein
NECEvent2014_8_4_scaffold_0_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30374..32497
DNA (2124bp) protein (708aa)
Ferrous iron transport protein B n=1 Tax=Clostridium perfringens F262 RepID=H7CUB7_CLOPF rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:EIA17639.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F2
feoB; ferrous iron transport protein B
Displaying items 1-30 of 115 in total

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