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NECEvent2014_8_4_scaffold_13

Alias: 178_004_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_13_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

270..2003
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HH55_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98594.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC transporter ATP-binding/permease
NECEvent2014_8_4_scaffold_13_2
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1996..3768
DNA (1773bp) protein (591aa)
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H825_9CLOT rbh
ABC transporter {ECO:0000313|EMBL:KEZ87303.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NECEvent2014_8_4_scaffold_13_3
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4224..5936
DNA (1713bp) protein (571aa)
Peptide ABC transporter periplasmic protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VUR6_PAETH rbh
extracellular solute-binding protein
Extracellular solute-binding protein {ECO:0000313|EMBL:CDM69271.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimens
NECEvent2014_8_4_scaffold_13_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6064..7026
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YPH8_CLOBU
Diguanylate cyclase {ECO:0000313|EMBL:KHD13622.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
appB; Oligopeptide transport system permease protein AppB
NECEvent2014_8_4_scaffold_13_5
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7038..7997
DNA (960bp) protein (320aa)
Putative peptide transporter permease subunit: membrane component of ABC superfamily n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PUD1_CLOSD rbh
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDM69269.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.
NECEvent2014_8_4_scaffold_13_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8009..9001
DNA (993bp) protein (331aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JC03_CLOBU
appD; Oligopeptide transport ATP-binding protein AppD
Oligopeptide transport ATP-binding protein AppD {ECO:0000313|EMBL:CDM69268.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
NECEvent2014_8_4_scaffold_13_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9005..9982
DNA (978bp) protein (326aa)
Thymidylate synthase {ECO:0000313|EMBL:KJZ86192.1}; EC=2.1.1.45 {ECO:0000313|EMBL:KJZ86192.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=2 Tax=Clostridium butyricum RepID=M8JDA2_CLOBU
appF1; Oligopeptide transport ATP-binding protein AppF
NECEvent2014_8_4_scaffold_13_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10014..10232
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YQ15_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KHD13618.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NECEvent2014_8_4_scaffold_13_9
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10300..11811
DNA (1512bp) protein (504aa)
Zn-dependent carboxypeptidase (EC:3.4.17.19)
Zn-dependent carboxypeptidase {ECO:0000313|EMBL:AGF59338.1}; EC=3.4.17.19 {ECO:0000313|EMBL:AGF59338.1};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
Zn-dependent carboxypeptidase n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MT94_9CLOT rbh
NECEvent2014_8_4_scaffold_13_10
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12049..15567
DNA (3519bp) protein (1173aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBT1_9CLOT rbh
NECEvent2014_8_4_scaffold_13_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15703..16263
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MZ60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJU71628.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative lipoprotein
NECEvent2014_8_4_scaffold_13_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16586..18322
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H3N9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98675.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_13_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18322..20109
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H4I1_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98674.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_13_14
unknown

Not on your lists

comp(20136..20297)
DNA (162bp) protein (54aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_13_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20534..20779
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY28345.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_8_4_scaffold_13_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20822..22399)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y3L1_9CLOT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83239.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_8_4_scaffold_13_17
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22581..23228
DNA (648bp) protein (216aa)
deoxyguanosine kinase (EC:2.7.1.113)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WH64_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ02431.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NECEvent2014_8_4_scaffold_13_18
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23387..27022
DNA (3636bp) protein (1212aa)
MMPL family protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0CUF2_CLOSO rbh
Acriflavin resistance protein {ECO:0000313|EMBL:CEO26498.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordell
Cation/multidrug efflux pump
NECEvent2014_8_4_scaffold_13_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27601..29499)
DNA (1899bp) protein (633aa)
NAD synthetase n=1 Tax=Clostridium botulinum RepID=UPI0003736B50
NAD synthetase {ECO:0000313|EMBL:KIL09278.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NAD+ synthetase
NECEvent2014_8_4_scaffold_13_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29791..30225
DNA (435bp) protein (145aa)
Nodulation efficiency protein D n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QE80_9CLOT
Nodulation efficiency protein D {ECO:0000313|EMBL:EKY26256.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 178
nodulation efficiency protein D
NECEvent2014_8_4_scaffold_13_21
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30228..31169
DNA (942bp) protein (314aa)
Band7 family protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CGQ2_9CLOT rbh
Band7 family protein {ECO:0000313|EMBL:EOR26356.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
band7 family protein
NECEvent2014_8_4_scaffold_13_22
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

31240..31422
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BNL1100 RepID=H2JJ19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KFZ26345.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
hypothetical protein
NECEvent2014_8_4_scaffold_13_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31541..32341
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H880_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98743.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fliY1; cystine-binding periplasmic protein FliY
NECEvent2014_8_4_scaffold_13_24
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32364..33008
DNA (645bp) protein (215aa)
Glutamine ABC transporter permease/substrate-binding protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CAH7_9CLOT
Glutamine ABC transporter permease/substrate-binding protein {ECO:0000313|EMBL:EOR26312.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
artQ1; arginine transport system permease protein ArtQ
NECEvent2014_8_4_scaffold_13_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33020..33709
DNA (690bp) protein (230aa)
ATP-binding protein n=2 Tax=Clostridium botulinum B RepID=B2TN67_CLOBB
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:ACD24973.1}; Probable amino acid ABC transporter {ECO:0000313|EMBL:CDH90019.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
NECEvent2014_8_4_scaffold_13_26
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33951..34634
DNA (684bp) protein (228aa)
Putative Permease n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EIX3_9CLOT rbh
Putative Permease {ECO:0000313|EMBL:CDG01182.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
permease
NECEvent2014_8_4_scaffold_13_27
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34654..35583
DNA (930bp) protein (310aa)
Putative Permease n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F823_9CLOT rbh
Putative Permease {ECO:0000313|EMBL:CDG01183.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
permease
NECEvent2014_8_4_scaffold_13_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35603..36244
DNA (642bp) protein (214aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {
pcp; pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FKJ5_9CLOT rbh
NECEvent2014_8_4_scaffold_13_29
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36244..36663
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6A5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96530.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_8_4_scaffold_13_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36849..38423
DNA (1575bp) protein (525aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=Q8XKI7_CLOPE rbh
Chloride channel protein {ECO:0000313|EMBL:KJU72793.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
voltage gated chloride channel family protein
Displaying items 1-30 of 80 in total

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