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NECEvent2014_8_4_scaffold_363

Alias: 178_004_scaffold_363

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_363_1
unknown

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159..542
DNA (384bp) protein (128aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_363_2
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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543..2252
DNA (1710bp) protein (570aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
PAS domain S-box protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHM3_9CLOT rbh
sensory transduction histidine kinase
NECEvent2014_8_4_scaffold_363_3
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2302..3306)
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU3_9CLOT rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY26456.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum
hypothetical protein
NECEvent2014_8_4_scaffold_363_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3510..4460
DNA (951bp) protein (317aa)
ABC-type Fe3+-hydroxamate transport system, periplasmic component n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CFX9_9CLOT rbh
ABC-type Fe3+-hydroxamate transport system, periplasmic component {ECO:0000313|EMBL:EOR28202.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
putative secreted protein
NECEvent2014_8_4_scaffold_363_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4447..5439
DNA (993bp) protein (331aa)
Putative iron(3+)-hydroxamate import system permease protein FhuB n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEQ4_9CLOT rbh
Putative iron(3+)-hydroxamate import system permease protein FhuB {ECO:0000313|EMBL:EKY26458.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
putative membrane protein
NECEvent2014_8_4_scaffold_363_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5439..6446
DNA (1008bp) protein (336aa)
Putative ferrichrome transport system permease protein FhuG n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEN7_9CLOT rbh
Putative ferrichrome transport system permease protein FhuG {ECO:0000313|EMBL:EKY26459.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
transport system permease
NECEvent2014_8_4_scaffold_363_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6449..7243
DNA (795bp) protein (265aa)
fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC (EC:3.6.3.34)
Putative ferrichrome ABC transporter, ATP-binding protein FhuC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFK1_9CLOT rbh
Putative ferrichrome ABC transporter, ATP-binding protein FhuC {ECO:0000313|EMBL:EKY26460.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
NECEvent2014_8_4_scaffold_363_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7240..8484
DNA (1245bp) protein (415aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QEU9_9CLOT rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY26461.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
major facilitator superfamily transporter
NECEvent2014_8_4_scaffold_363_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8563..9414)
DNA (852bp) protein (284aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium sp. DL-VIII RepID=G7M687_9CLOT rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EHJ00803.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-V
RpiR family transcriptional regulator
NECEvent2014_8_4_scaffold_363_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9450..10301)
DNA (852bp) protein (284aa)
HAD phosphatase superfamily protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C6R1_9CLOT rbh
HAD phosphatase superfamily protein {ECO:0000313|EMBL:EOR25059.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagofor
cof family hydrolase
NECEvent2014_8_4_scaffold_363_11
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10518..11387
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KXH9_9CLOT rbh
map; methionine aminopeptidase
NECEvent2014_8_4_scaffold_363_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11473..11976
DNA (504bp) protein (168aa)
GNAT family acetyltransferase n=1 Tax=Clostridium beijerinckii RepID=UPI0003032CCF
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AJH00013.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Cl
NECEvent2014_8_4_scaffold_363_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11991..12845
DNA (855bp) protein (285aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CSJ4_CLOPF
Membrane protein {ECO:0000313|EMBL:KJU71692.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_8_4_scaffold_363_14
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12968..15157)
DNA (2190bp) protein (730aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CEQ10410.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
two-component sensor kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002880AD4
sensory transduction histidine kinase
Displaying 14 items

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