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NECEvent2014_8_4_scaffold_413

Alias: 178_004_scaffold_413

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_413_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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39..812
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D627_9FIRM
bceA; ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI91773.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.
NECEvent2014_8_4_scaffold_413_2
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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966..1595
DNA (630bp) protein (210aa)
Phage shock protein A n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NEY9_9FIRM
Phage shock protein A {ECO:0000313|EMBL:CDF11146.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium s
phage shock protein A, PspA
NECEvent2014_8_4_scaffold_413_3
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1609..2667
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P060_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:CCZ03041.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
NECEvent2014_8_4_scaffold_413_4
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2680..3660
DNA (981bp) protein (327aa)
Band 7 protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SR57_CLOC7 rbh
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ADL50345.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296
NECEvent2014_8_4_scaffold_413_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4077..4934
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLS5_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKY28939.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_8_4_scaffold_413_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4938..5762
DNA (825bp) protein (275aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KQK9_9CLOT rbh
NECEvent2014_8_4_scaffold_413_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5773..6618
DNA (846bp) protein (282aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FCC1_9CLOT rbh
NECEvent2014_8_4_scaffold_413_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6608..7021
DNA (414bp) protein (138aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMZ6_9CLOT
NECEvent2014_8_4_scaffold_413_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7205..7525
DNA (321bp) protein (107aa)
Rhodanese-like protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QHC7_9CLOT
Rhodanese-like protein {ECO:0000313|EMBL:EKY27414.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
rhodanese-like domain-containing protein
NECEvent2014_8_4_scaffold_413_10
Clostridium phage vB_CpeS-CP51, Caudovirales, Viruses

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7843..8172
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium phage vB_CpeS-CP51 RepID=M9Q2L2_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGH27917.1}; TaxID=1305708 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage vB_CpeS-CP51.;"
NECEvent2014_8_4_scaffold_413_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8326..9465
DNA (1140bp) protein (380aa)
Serine--pyruvate transaminase {ECO:0000313|EMBL:EHJ01606.1}; EC=2.6.1.51 {ECO:0000313|EMBL:EHJ01606.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
Serine--pyruvate transaminase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M4N1_9CLOT rbh
serine--pyruvate transaminase
NECEvent2014_8_4_scaffold_413_12
unknown

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9531..9932
DNA (402bp) protein (134aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_413_13
unknown

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comp(10154..10600)
DNA (447bp) protein (149aa)

This feature has no annotations

NECEvent2014_8_4_scaffold_413_14
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10778..12538
DNA (1761bp) protein (587aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium botulinum (strain Eklund 17B / Type B) RepID=B2TM90_CLOBB rbh
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACD24774.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_8_4_scaffold_413_15
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12610..13806
DNA (1197bp) protein (399aa)
Sodium/glutamate symporter n=2 Tax=Clostridium botulinum RepID=F4A8P7_CLOBO rbh
gltS; sodium/glutamate symporter rbh
Sodium/glutamate symporter {ECO:0000313|EMBL:AIY84954.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulliv
Displaying 15 items

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