ggKbase home page

NECEvent2014_8_4_scaffold_529

Alias: 178_004_scaffold_529

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_8_4_scaffold_529_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..130
DNA (129bp) protein (43aa)
Response regulator receiver protein n=1 Tax=Clostridium intestinale URNW RepID=U2PST2_9CLOT
Response regulator receiver protein {ECO:0000313|EMBL:ERK29500.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinal
response regulator receiver protein
NECEvent2014_8_4_scaffold_529_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

140..1924
DNA (1785bp) protein (595aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
Multi-sensor signal transduction histidine kinase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CED5_9CLOT rbh
HAMP domain protein
NECEvent2014_8_4_scaffold_529_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1884..2876
DNA (993bp) protein (331aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=2 Tax=Clostridium saccharoperbutylacetonicum RepID=M1MUQ8_9CLOT
periplasmic binding s and sugar binding domain of LacI family protein
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:AIY83606.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
NECEvent2014_8_4_scaffold_529_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2904..3947
DNA (1044bp) protein (348aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G5P7_CLOPA rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJU72345.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
periplasmic binding domain protein
NECEvent2014_8_4_scaffold_529_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3993..4325)
DNA (333bp) protein (111aa)
HesB-like selenoprotein n=1 Tax=Clostridium colicanis 209318 RepID=N9XZ93_9CLOT
HesB-like selenofamily protein
Fe-S cluster assembly protein HesB {ECO:0000313|EMBL:KJU72056.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_8_4_scaffold_529_6
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4534..5289
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYR9_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB14171.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
ribosomal RNA adenine dimethylase family protein
NECEvent2014_8_4_scaffold_529_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5387..7834)
DNA (2448bp) protein (816aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AIY84261.1}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AIY84261.1};; Leucyl-tRNA synthetase {ECO:0000256|HAM
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FYS1_9CLOT
NECEvent2014_8_4_scaffold_529_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8142..9038)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97320.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
traB family protein
NECEvent2014_8_4_scaffold_529_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9452..9814
DNA (363bp) protein (121aa)
Putative Integral membrane protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXT4_9CLOT
Putative Integral membrane protein {ECO:0000313|EMBL:CDG01056.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF
hypothetical protein
NECEvent2014_8_4_scaffold_529_10
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9862..11190)
DNA (1329bp) protein (443aa)
Amino acid permease-associated region n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JPQ0_CELLD rbh
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADZ83710.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticu
NECEvent2014_8_4_scaffold_529_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11463..11558
DNA (96bp) protein (32aa)
Reverse rubrerythrin-1 n=3 Tax=Clostridium colicanis 209318 RepID=N9Y3C6_9CLOT
Reverse rubrerythrin-1 {ECO:0000313|EMBL:ENZ02654.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
rubredoxin/rubrerythrin
Displaying 11 items

View Taxonomy